DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and trpc2a

DIOPT Version :10

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_017206723.1 Gene:trpc2a / 559914 ZFINID:ZDB-GENE-130530-602 Length:855 Species:Danio rerio


Alignment Length:846 Identity:274/846 - (32%)
Similarity:424/846 - (50%) Gaps:134/846 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 KFLLAVERGDMA----------GTRRMLQKAQDTEYINVNCVDPLGRTALLMAI--DNENLEMVE 136
            :.:||::.|:||          |..|.|.:::|.          |.|.||.::|  .:|:: |..
Zfish    22 ELILAIQEGNMAWVDSLLSLGDGIIRQLDESEDR----------LWREALNLSIRLGSEDI-MTS 75

  Fly   137 LLINYNVDTK---DALLHSISEEFVEAVEVLLDHENVTFHSEGN----HSWESA----SEDTSTF 190
            ||:....|.:   :|||.::.......|:.|||..::   .:||    .|:..|    |.|.|.|
Zfish    76 LLLGVKFDFRQIHEALLVAVDTNQPRFVKHLLDRLDL---EKGNKMDVRSFSMAIFDHSIDDSQF 137

  Fly   191 TPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALA 255
            .|.:|||.||..:|.|||:.:|..||..:|:||.:.|.|.||...||.|.|:.|.||||.||.:|
Zfish   138 APGVTPLTLACQKDLYEIVMMLTQRGHDIPLPHAISCTCLECNNGRQYDLLKFSLSRINTYRGIA 202

  Fly   256 SPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILL 320
            |.:.::::|:|.:|:||.||.|||:||..|.|||.:|..|.:.||:||..||...|...|:..:|
Zfish   203 SRAYLSITSEDAMLSAFHLSKELRKLSKKEPEFKPQYLALEELCQEFAVELLGMCRNQSEVSTIL 267

  Fly   321 N--------HDPTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNM 377
            |        .:.....:|.| ..:|.||:||:...||:||.|...||:|:|||...|.|:|....
Zfish   268 NSAEGDSEDEELDEQTFEEG-IPNLARLRLAVNYNQKQFVTHPICQQVLSSIWCGSLSGWRGSRT 331

  Fly   378 ALQAVDIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRIETFI 442
            ..:.:..:.|.:..|:..|.|.:||.|.:|:.::.|.|||:.|||||..||..|:..|..:|.:.
Zfish   332 TWKLLVSLGIFLTMPVLCLIYWIAPKSKLGKLLKVPVIKFLLHSASYMWFLIALLTESIFMEIYR 396

  Fly   443 GGWFFADSSGMLNTMEELPTKRGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVID 507
            ..:...:.:.:.|::.                 :.||:|..|.|.|::|..||:.|..|:||::|
Zfish   397 TEFASRNQNILHNSLH-----------------MVWVAGFFWFECKEVWIEGLKSYFLDLWNILD 444

  Fly   508 FVTNSLYVATVALRVV----SFFQVQKEMIYN--SHATDLPRERWDAWDPMLISEGLFSAANIFS 566
            .:..|:|:|:..||::    .:|..|......  .:.|:..||.|...||.||:|.||:..::.|
Zfish   445 MMVLSMYLASFTLRILIMLKGYFLCQDSSTQELCDYFTNTVRENWRQEDPQLIAETLFAVTSMLS 509

  Fly   567 SLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVS 631
            ..:|.||...:..||.||:|:.||:.|:|:|.|:.:::..||..|:|.:...|.         :|
Zfish   510 FTRLAYILPAHESLGTLQISMGRMIDDMMRFMFILMIIGTAFLCGINNIYVPYV---------IS 565

  Fly   632 PMSALLNMNGTNDPNACIVWRRFSNLFETTQTLFWAVFGL-----IDLDSFELDGIKIFTRFWGM 691
            |....||                    ||...|||.:||:     :|:..:.|      ..|.|.
Zfish   566 PHLGRLN--------------------ETFNFLFWTMFGMANQGYVDMPDYAL------AEFVGR 604

  Fly   692 LMFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTP 756
            :.:|.::::.::||||:||||:::|:|.|.:.||||||||||||::|||.||.|.|.||||||:|
Zfish   605 IFYGIFTLLIVIVLLNMLIAMISNSFQRIEDDADVEWKFARSKLYLSYFREGLTMPVPFNIIPSP 669

  Fly   757 KSIWYAIKWMRRVF-----CSGSSAARREHLKTIRRKAQ-----QASDRDFKYQQIMRNLVRRYV 811
            |:.:|.   :|.:|     |....|.....:.::...|.     |...|.....|:.:.||.||:
Zfish   670 KAFFYI---LRGIFQKICCCCQKKAPEYPPITSVSSNAMNSGGGQGEGRVPYRLQVTKALVHRYI 731

  Fly   812 TVEQRKAESQGVTEDDV----NEIKQDISAFRCELVEI---LK--NSG-MDTNVTAGQGGGGGKK 866
            ...:|:.|..  |..||    .|:.:.:.....|:.:.   ||  |.| .|.....|:...|.|.
Zfish   732 EAARREFEES--TRKDVGNRITELNKVVGRLHTEMKDFQQKLKWQNKGEPDQANILGKYIKGAKN 794

  Fly   867 N 867
            |
Zfish   795 N 795

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 264/812 (33%)
ANK repeat 118..147 CDD:293786 10/33 (30%)
ANK repeat 175..217 CDD:293786 20/49 (41%)
TRP_CaM_bind1 865..>891 CDD:467881 2/3 (67%)
trpc2aXP_017206723.1 TRPV 54..762 CDD:454755 256/779 (33%)

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