DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and trpc5b

DIOPT Version :10

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_073791538.1 Gene:trpc5b / 559586 ZFINID:ZDB-GENE-091112-24 Length:1026 Species:Danio rerio


Alignment Length:798 Identity:407/798 - (51%)
Similarity:551/798 - (69%) Gaps:71/798 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 PHQEIR---QLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENL 132
            |.|.:|   :|:.:|:.:|.|||:||.||.::.|::|.....|||||:|||||:|||:||:||||
Zfish    22 PLQIVRAEVELSAKERAYLTAVEKGDYAGVKQALEEADIYYNINVNCLDPLGRSALLIAIENENL 86

  Fly   133 EMVELLINYNVDTKDALLHSISEEFVEAVEVLLDHENVTFHSEGNHSWESASEDT--STFTPDIT 195
            |::|||:::.|.|.||||::|.:|.|.|||:||.:....    |.....|...||  |.||||||
Zfish    87 EVMELLLSHGVHTGDALLYAIRKEVVGAVELLLSYRKPC----GEKQVPSLMMDTQFSEFTPDIT 147

  Fly   196 PLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRALASPSLI 260
            |::||||.:||||||:|:.|...:|.||.:||.|.|||.|.:.|||||||||:|.|:||||||||
Zfish   148 PIMLAAHTNNYEIIKLLVQRKVTIPRPHQIRCDCVECVSSSEVDSLRHSRSRLNIYKALASPSLI 212

  Fly   261 ALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNH-DP 324
            ||||:|||||||.|.|||:.||.:|:||:.||.||.:||:.||..|||..|:|.|||.:||| |.
Zfish   213 ALSSEDPILTAFRLGWELKELSKVENEFRQEYDELSQQCKLFAKDLLDQARSSRELETILNHRDD 277

  Fly   325 TGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGI 389
            .....:.||...|.:||||||..||:|||..|.|||||::||:|.||:||::.|::.|....||:
Zfish   278 HSEELDLGECRDLAKLKLAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRRHWAVKLVTCFIIGL 342

  Fly   390 MFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRIETFIGGWFFADSSGML 454
            :||:||:.|:|||.|::|..::|||||||||:|||.||||||:||||.|                
Zfish   343 LFPVFSIIYLLAPKSTLGTFIKKPFIKFICHTASYLTFLFLLLLASQHI---------------- 391

  Fly   455 NTMEELPTKRGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVA 519
             ...:|.. :|..|||:||:||.||.|.||:|:|::||.|..||::|.||::||..||||:||::
Zfish   392 -VQTDLHV-QGPPPTFVEWMILPWVLGFIWAEIKEMWDGGFTEYIHDWWNLMDFAMNSLYLATIS 454

  Fly   520 LRVVSFFQVQKEMIYNSHATDLPRERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQ 584
            |::|::|:      |||   ..||..|:.|.|.||:|.||:.|||||||:|:.:|:.|.||||||
Zfish   455 LKMVAYFK------YNS---SRPRVEWEMWHPTLIAEALFAIANIFSSLRLISLFTANSHLGPLQ 510

  Fly   585 VSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACI 649
            :||.||::||:||.|:|.|||.||.:|||||.:||   |.|               .:.:||.|.
Zfish   511 ISLGRMLLDILKFLFIYCLVLLAFANGLNQLYFYY---ETK---------------ASEEPNNCK 557

  Fly   650 VWR------RFSNLFETTQTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNL 708
            ..|      .||.||||.|:|||:||||::|....:.....||.|.|..|||||:||::|||||:
Zfish   558 GIRCEKQNNAFSTLFETLQSLFWSVFGLLNLYVTNVKARHEFTEFVGATMFGTYNVISLVVLLNM 622

  Fly   709 LIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFCSG 773
            ||||||:|||||::.||:||||||:|||:|||:||||.||||||||:|||:||...|:....| |
Zfish   623 LIAMMNNSYQLIADHADIEWKFARTKLWMSYFDEGGTLPPPFNIIPSPKSVWYLCVWLHCRLC-G 686

  Fly   774 SSAARRE----HLKTIRRKAQQASD---RDFKYQQIMRNLVRRYVTVEQRKAES-QGVTEDDVNE 830
            ....|.|    | |.::...::.:|   ::..||:::||||:|||....|.|:: :|:||::..|
Zfish   687 HGEPRHEDKCKH-KNLKEFTERHADNLIQNQHYQEVIRNLVKRYVAAMIRSAKTDEGLTEENFKE 750

  Fly   831 IKQDISAFRCELVEILKN 848
            :|||||:||.|::::|.|
Zfish   751 LKQDISSFRYEVLDLLGN 768

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 401/780 (51%)
ANK repeat 118..147 CDD:293786 18/28 (64%)
ANK repeat 175..217 CDD:293786 24/43 (56%)
TRP_CaM_bind1 865..>891 CDD:467881
trpc5bXP_073791538.1 None
Blue background indicates that the domain is not in the aligned region.

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