DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and Trpc7

DIOPT Version :9

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_017455952.1 Gene:Trpc7 / 282822 RGDID:628820 Length:904 Species:Rattus norvegicus


Alignment Length:859 Identity:309/859 - (35%)
Similarity:453/859 - (52%) Gaps:179/859 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KRHSIHG---MMEEENTIRPHQEIRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVD 116
            :|.:|.|   |..|:.|        .||.||::||.:.|.|::...|:||   ::::.:|.||||
  Rat   119 RRQAIRGPAYMFNEKGT--------SLTPEEERFLDSAEYGNIPVVRKML---EESKTLNFNCVD 172

  Fly   117 PLGRTALLMAIDNENLEMVELLINYN--VDTKDALLHSISEEFVEAVEVLLDH------ENVTF- 172
            .:|:.||.:|:.||:||:.|||:...  ....||||.:||:.:|..||.:|.|      :.:|. 
  Rat   173 YMGQNALQLAVGNEHLEVTELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAQGQRLTLS 237

  Fly   173 ---HSEGNHSWESASEDTSTFTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQ 234
               ....:..:.:..||.:.|:.||||:|||||...|||:.|||.:||.:..|||..|.|:||.:
  Rat   238 PLEQELRDDDFYAYDEDGTRFSHDITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKCNECTE 302

  Fly   235 SRQEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQC 299
            .:::||..|||||:|||:.|||.:.::|||:||:|||.|||.||.||:.:|.||||:|::|..||
  Rat   303 KQRKDSFSHSRSRMNAYKGLASAAYLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQC 367

  Fly   300 QDFATALLDHTRTSHELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASI 364
            :||...:||..|.:.|:|.:||.|....|:....|..|:|:|||||...||              
  Rat   368 KDFVVGVLDLCRDTEEVEAILNGDVNLQVWSDHHRPSLSRIKLAIKYEVKK-------------- 418

  Fly   365 WYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLF 429
                                                     :|:|:|.||:||:.|:.|:..||.
  Rat   419 -----------------------------------------LGRTLRSPFMKFVAHAVSFTIFLG 442

  Fly   430 LLML-ASQRIETFIGGWFFADSSGMLNTMEELPTKR---------GAKPTFIEW---LILAWVSG 481
            ||:: ||.|.|                .::.||.:.         ..|.|...|   ||:.||.|
  Rat   443 LLVVNASDRFE----------------GVKTLPNETFTDYPKQIFRVKTTQFSWTEMLIMKWVLG 491

  Fly   482 LIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIY--------NSHA 538
            :||||.|::|:.|.:||:..:||::||...|::||:...|.::|.:..:..:|        ..|.
  Rat   492 MIWSECKEIWEEGPREYVLHLWNLLDFGMLSVFVASFTARFMAFLKASEAQLYVDQYVQDVTLHN 556

  Fly   539 TDLP---------RERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDI 594
            ..||         |::|...||.:|||||::.|.:.|..::.||...|...||||:||.|.|.||
  Rat   557 VSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDI 621

  Fly   595 MKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFSNLFE 659
            .||..::::|..||..|:..|..||      |..:.:|                    .|:.:.|
  Rat   622 FKFMVIFIMVFVAFMIGMFNLYSYY------RGAKYNP--------------------AFTTVEE 660

  Fly   660 TTQTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERA 724
            :.:||||::|||.::.|..|.....|....|.:::|.|:|..:|||||:||||:|:|||.|.|.|
  Rat   661 SFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDA 725

  Fly   725 DVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFC----SGSSAARREH---- 781
            ||||||||:|||:|||:||.|.|.|||::|:|||.:|.|  ||...|    ..|.|.|.|:    
  Rat   726 DVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLI--MRIKMCLIKLCKSKAKRCENDLEM 788

  Fly   782 --LKTIRRKAQ-QASDRD-------------FKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNE 830
              |.:..||.: ||..|:             .:||:||:.|::|||...|...|:..|.|.::.|
  Rat   789 GMLNSKFRKTRYQAGMRNSENLTANSTFSKPTRYQKIMKRLIKRYVLKAQVDRENDEVNEGELKE 853

  Fly   831 IKQDISAFRCELVE 844
            ||||||:.|.||:|
  Rat   854 IKQDISSLRYELLE 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 300/829 (36%)
ANK 113..>217 CDD:238125 45/115 (39%)
ANK repeat 118..147 CDD:293786 11/30 (37%)
ANK repeat 175..217 CDD:293786 18/41 (44%)
TRP_2 227..286 CDD:285535 32/58 (55%)
RRT14 <778..892 CDD:293680 31/87 (36%)
Trpc7XP_017455952.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
54.770

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