DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Trpgamma and Trpc7

DIOPT Version :9

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:XP_006517325.1 Gene:Trpc7 / 26946 MGIID:1349470 Length:906 Species:Mus musculus


Alignment Length:859 Identity:310/859 - (36%)
Similarity:453/859 - (52%) Gaps:179/859 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 KRHSIHG---MMEEENTIRPHQEIRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVD 116
            :|.:|.|   |..|:.|        .||.||::||.:.|.|::...|:||   ::::.:|.||||
Mouse   121 RRQAIRGPAYMFNEKGT--------SLTPEEERFLDSAEYGNIPVVRKML---EESKTLNFNCVD 174

  Fly   117 PLGRTALLMAIDNENLEMVELLINYN--VDTKDALLHSISEEFVEAVEVLLDH------ENVTF- 172
            .:|:.||.:|:.||:||:.|||:...  ....||||.:||:.:|..||.:|.|      :.:|. 
Mouse   175 YMGQNALQLAVGNEHLEVTELLLKKENLARVGDALLLAISKGYVRIVEAILSHPAFAQGQRLTLS 239

  Fly   173 ---HSEGNHSWESASEDTSTFTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQ 234
               ....:..:.:..||.:.|:.||||:|||||...|||:.|||.:||.:..|||..|.|:||.:
Mouse   240 PLEQELRDDDFYAYDEDGTRFSHDITPIILAAHCQEYEIVHILLLKGARIERPHDYFCKCNECTE 304

  Fly   235 SRQEDSLRHSRSRINAYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQC 299
            .:::||..|||||:|||:.|||.:.::|||:||:|||.|||.||.||:.:|.||||:|::|..||
Mouse   305 KQRKDSFSHSRSRMNAYKGLASAAYLSLSSEDPVLTALELSNELARLANIETEFKNDYRKLSMQC 369

  Fly   300 QDFATALLDHTRTSHELEILLNHDPTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASI 364
            :||...:||..|.:.|:|.:||.|....|:....|..|:|:|||||...||              
Mouse   370 KDFVVGVLDLCRDTEEVEAILNGDVNLQVWSDHHRPSLSRIKLAIKYEVKK-------------- 420

  Fly   365 WYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLF 429
                                                     :|||:|.||:||:.|:.|:..||.
Mouse   421 -----------------------------------------LGQTLRSPFMKFVAHAVSFTIFLG 444

  Fly   430 LLML-ASQRIETFIGGWFFADSSGMLNTMEELPTKR---------GAKPTFIEW---LILAWVSG 481
            ||:: ||.|.|                .::.||.:.         ..|.|...|   ||:.||.|
Mouse   445 LLVVNASDRFE----------------GVKTLPNETFTDYPKQIFRVKTTQFSWTEMLIMKWVLG 493

  Fly   482 LIWSEVKQLWDVGLQEYLNDMWNVIDFVTNSLYVATVALRVVSFFQVQKEMIY--------NSHA 538
            :||||.|::|:.|.:||:..:||::||...|::||:...|.::|.:..:..:|        ..|.
Mouse   494 MIWSECKEIWEEGPREYVLHLWNLLDFGMLSIFVASFTARFMAFLKASEAQLYVDQYVQDVTLHN 558

  Fly   539 TDLP---------RERWDAWDPMLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDI 594
            ..||         |::|...||.:|||||::.|.:.|..::.||...|...||||:||.|.|.||
Mouse   559 VSLPPEVAYFTYARDKWWPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDI 623

  Fly   595 MKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFSNLFE 659
            .||..::::|..||..|:..|..||      |..:.:|                    .|:.:.|
Mouse   624 FKFMVIFIMVFVAFMIGMFNLYSYY------RGAKYNP--------------------AFTTVEE 662

  Fly   660 TTQTLFWAVFGLIDLDSFELDGIKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERA 724
            :.:||||::|||.::.|..|.....|....|.:::|.|:|..:|||||:||||:|:|||.|.|.|
Mouse   663 SFKTLFWSIFGLSEVISVVLKYDHKFIENIGYVLYGVYNVTMVVVLLNMLIAMINNSYQEIEEDA 727

  Fly   725 DVEWKFARSKLWISYFEEGGTCPPPFNIIPTPKSIWYAIKWMRRVFC----SGSSAARREH---- 781
            ||||||||:|||:|||:||.|.|.|||::|:|||.:|.|  ||...|    ..|.|.|.|:    
Mouse   728 DVEWKFARAKLWLSYFDEGRTLPAPFNLVPSPKSFYYLI--MRIKMCLIELCQSKAKRCENDLEM 790

  Fly   782 --LKTIRRKAQ-QASDRD-------------FKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNE 830
              |.:..||.: ||..|:             .:||:||:.|::|||...|...|:..|.|.::.|
Mouse   791 GMLNSKFRKTRYQAGMRNSENLTANSTFSKPTRYQKIMKRLIKRYVLKAQVDRENDEVNEGELKE 855

  Fly   831 IKQDISAFRCELVE 844
            ||||||:.|.||:|
Mouse   856 IKQDISSLRYELLE 869

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 301/829 (36%)
ANK 113..>217 CDD:238125 45/115 (39%)
ANK repeat 118..147 CDD:293786 11/30 (37%)
ANK repeat 175..217 CDD:293786 18/41 (44%)
TRP_2 227..286 CDD:285535 32/58 (55%)
RRT14 <778..892 CDD:293680 31/87 (36%)
Trpc7XP_006517325.1 trp 126..866 CDD:273311 305/849 (36%)
ANK repeat 176..207 CDD:293786 11/30 (37%)
ANK repeat 208..254 CDD:293786 11/45 (24%)
ANK repeat 256..291 CDD:293786 19/34 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3609
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.770

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