DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and trp-2

DIOPT Version :10

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001022703.1 Gene:trp-2 / 192056 WormBaseID:WBGene00006615 Length:886 Species:Caenorhabditis elegans


Alignment Length:874 Identity:403/874 - (46%)
Similarity:563/874 - (64%) Gaps:64/874 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 MMEEENTIRPH---QEIRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTAL 123
            |:|:::.:..:   .|.....|.||:|||:.||||:...|::| ....||..|:||:|||||.||
 Worm    11 MIEDDDDVSNNVTWTESDNSRLREKQFLLSCERGDIGSVRKLL-AGISTETFNINCLDPLGRNAL 74

  Fly   124 LMAIDNENLEMVELLINYNVDTKDALLHSISEEFVEAVEVLLDH-ENV-TFHSEGNHSWESASED 186
            |:||:|||:||:|||:::|::|.||:|::|.||.|||||::::| |.: .|.||     ....|.
 Worm    75 LIAIENENIEMIELLLDHNIETGDAILYAIGEENVEAVEIIVEHLEKMDKFDSE-----RQGVEI 134

  Fly   187 T--STFTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRIN 249
            |  |.|||||||::||||:||||.||:.||:...:|.||||||.|.||..:|:|||||.||||||
 Worm   135 TEHSAFTPDITPIVLAAHKDNYECIKLFLDKKGTVPHPHDVRCSCPECYVAREEDSLRLSRSRIN 199

  Fly   250 AYRALASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSH 314
            |||||.|||||.||::||||.||||||||:||||:|:||:.:|:||.::||.|...:||..|.|.
 Worm   200 AYRALTSPSLICLSARDPILYAFELSWELKRLSFIENEFRTDYEELSQKCQKFCVHMLDQVRGSK 264

  Fly   315 ELEILLN------HDPTGPVYEHGERMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFR 373
            |||::||      ||.|...|.:.|:  |.||||||:|.||:||||.|.||||..|||||:...|
 Worm   265 ELEVVLNHTTNAWHDVTSANYGNPEK--LARLKLAIQLSQKRFVAHPNCQQLLLDIWYEGVESVR 327

  Fly   374 RKNMALQAVDIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRI 438
            ..|...:.:..|...:.||:|||.|:|||:||:||..:||||||:.||.||..||.||::||||:
 Worm   328 CTNFIYKLIFYILGMLSFPLFSLVYLLAPHSSMGQFAKKPFIKFLSHSGSYIFFLILLIMASQRM 392

  Fly   439 ETFIGGWFFADSSGMLNTMEELPTK--RGAKPTFIEWLILAWVSGLIWSEVKQLWDVGLQEYLND 501
            ...         ..:|.| :::..|  ||..||.||..|..||.||||.|:||||:.||..|..:
 Worm   393 NVI---------DNILRT-DDVDRKETRGPPPTIIECAIFLWVLGLIWVEIKQLWECGLYNYCRN 447

  Fly   502 MWNVIDFVTNSLYVATVALRVVSFFQVQKEMI-YNS-H-ATDLPRERWDAWDPMLISEGLFSAAN 563
            :||::||:|||||:.|.|||||::.||::|.: .|| | |..|||..||||||.|:||..|:.||
 Worm   448 LWNILDFITNSLYLCTTALRVVAYVQVEQEALRANSVHIARHLPRRDWDAWDPTLLSECFFATAN 512

  Fly   564 IFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLLWYYADLEKKRCP 628
            ||||||||:||:|:||||||::||.|||:||:|||.:|.||||||..||||||||||.:.:..|.
 Worm   513 IFSSLKLVHIFTVSPHLGPLKISLGRMVIDIVKFFMVYALVLFAFACGLNQLLWYYASMRQNECN 577

  Fly   629 --EVSPMSALLNMNGTNDPNAC-IVWRRFSNLFETTQTLFWAVFGLIDLDSFELDGIKIFTRFWG 690
              |.......|:....:...:| ..::..|:::.|.:|||||:|||:||..|.|......:.:.|
 Worm   578 LYEQYKNEKSLSYKYEHLKESCDDKYKSCSSIYHTAETLFWALFGLVDLTHFRLKEDHFLSEWTG 642

  Fly   691 MLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTCPPPFNIIPT 755
            ..:||:|...:|:||||:|||||::|||.||::||:|||||||:|::.||::..|.||||||:|:
 Worm   643 KTIFGSYCCCSIIVLLNMLIAMMSNSYQYISDQADIEWKFARSRLFLEYFDDTATLPPPFNIVPS 707

  Fly   756 PKSIWYAIKWMRRVFCSGSSAARREHLKTIRRKAQQASDRDFKYQQIMRNLVRRYVTVEQRKAES 820
            ||||:|.:.::.:..|:.:...:....|::|.:::..:.|....:|:..|..:...:..|..:.:
 Worm   708 PKSIYYCLHYLTKKLCNCTKLQQPSKQKSMRVESKNLAIRQRPRKQLPENCAKNRYSGAQFHSRN 772

  Fly   821 QGVTEDDVNEIKQDISAFRCELVEILKNSGMDTNVTAGQGGGGGKKNRQKERRLMKGFNIAPPGS 885
            :..|......:|.  ||.      :||...:.....|||                :..:|:...|
 Worm   773 KKKTAMAERRLKN--SAL------LLKEFPVPQMFKAGQ----------------RNMSISSIQS 813

  Fly   886 TGSLAPVAEFSTSLDNYDNQHEILSSTLS 914
            .|.|.|....|:|..::.|. ::.:|.||
 Worm   814 NGRLKPSFMPSSSKLSWSNL-KVKASRLS 841

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 384/781 (49%)
ANK repeat 118..147 CDD:293786 18/28 (64%)
ANK repeat 175..217 CDD:293786 23/43 (53%)
TRP_CaM_bind1 865..>891 CDD:467881 4/25 (16%)
trp-2NP_001022703.1 TRPV 34..757 CDD:454755 377/740 (51%)
ANK repeat 69..96 CDD:293786 17/26 (65%)

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