DRSC/TRiP Functional Genomics Resources

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Protein Alignment Trpgamma and trpc3

DIOPT Version :10

Sequence 1:NP_001137830.2 Gene:Trpgamma / 34991 FlyBaseID:FBgn0032593 Length:1188 Species:Drosophila melanogaster
Sequence 2:NP_001276813.2 Gene:trpc3 / 101887082 ZFINID:ZDB-GENE-140129-1 Length:902 Species:Danio rerio


Alignment Length:902 Identity:343/902 - (38%)
Similarity:494/902 - (54%) Gaps:140/902 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 GADAADSAEKKLGSESSGSGHIAVQIE---PARRV-------KRHSIHG---MMEEENTIRPHQE 74
            |.||......|...||||.....::..   |.||:       :|.:|.|   |.....|      
Zfish    31 GVDAHHLKSVKTVRESSGYYRYNMKSSESFPHRRMTLPREKGRRQAIRGPAFMFNARGT------ 89

  Fly    75 IRQLTLEEKKFLLAVERGDMAGTRRMLQKAQDTEYINVNCVDPLGRTALLMAIDNENLEMVELLI 139
              .||.||::||.|.|.|::...|:||:::..   :||||:|.:|:..|.:|:.||:||:.|||:
Zfish    90 --SLTPEEERFLDAAEYGNIPVVRKMLEESLT---LNVNCMDYMGQNGLQLAVGNEHLEVTELLL 149

  Fly   140 NYN--VDTKDALLHSISEEFVEAVEVLLDHENVTFHSEGN-------------HSWESASEDTST 189
            ..:  ....||||.:||:.:|..||.||.|.     |.||             ..:.|..||.:.
Zfish   150 RRDNLARVGDALLLAISKGYVRIVEALLGHP-----SFGNGERLTRSPCELQDDDFYSYDEDGTR 209

  Fly   190 FTPDITPLILAAHRDNYEIIKILLDRGAVLPMPHDVRCGCDECVQSRQEDSLRHSRSRINAYRAL 254
            |:|||||:|||||...||::.:||.:||.:..|||..|.|.:|.:.:::||..||||||||||.|
Zfish   210 FSPDITPIILAAHCQKYEVVHMLLLKGARIERPHDYFCKCADCTEKQRKDSFSHSRSRINAYRGL 274

  Fly   255 ASPSLIALSSKDPILTAFELSWELRRLSFLEHEFKNEYQELRKQCQDFATALLDHTRTSHELEIL 319
            |||:.::|||:||:|||.|||.||.:|:.:|.||||:|::|..||:||...:||..|.:.|:|.:
Zfish   275 ASPAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAI 339

  Fly   320 LNHDPTGPVYEHGE--RMHLNRLKLAIKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAV 382
            ||.|.:..: |.|:  |..|:|:|||||...||||||.|.||.|.:||||.|.|.|.:..|::.:
Zfish   340 LNGDVSAEL-EEGQHHRSLLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTTAVKCL 403

  Fly   383 DIIRIGIMFPIFSLAYILAPYSSIGQTMRKPFIKFICHSASYFTFLFLLML-ASQRIETFIGGWF 446
            .::.:.:..|:.::.|..||.|.:|:.:|.||:||:.|:||:..||.||:. ||.|.|       
Zfish   404 VVLVVALGLPLLAVGYWFAPCSKLGKILRSPFMKFVAHAASFIIFLCLLVFNASDRFE------- 461

  Fly   447 FADSSGMLN----TMEELPTK-RGAKPTFIEW---LILAWVSGLIWSEVKQLWDVGLQEYLNDMW 503
                 |:..    |:.:.|.: ...|.|...|   ||:.||:|::|||.|:||..|.:||:..:|
Zfish   462 -----GITTLPNVTVTDHPLQIFRVKTTQFSWTEILIMVWVAGMMWSECKELWTEGPREYIMQLW 521

  Fly   504 NVIDFVTNSLYVATVALRVVSFFQVQKEMIY---NSHATDL--------------PRERWDAWDP 551
            ||:||...|:::|....|..:|.|..|...|   ..||.||              .|::|...||
Zfish   522 NVLDFGMLSIFIAAFTARFFAFMQAMKAQKYVDEKIHAPDLSMVTLPPDVRYFTYARDKWLPSDP 586

  Fly   552 MLISEGLFSAANIFSSLKLVYIFSVNPHLGPLQVSLSRMVMDIMKFFFLYVLVLFAFGSGLNQLL 616
            .||||||::.|.:.|..::.||...|...||||:||.|.|.||.||..|:::|..||..|:..|.
Zfish   587 QLISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVLFIMVFLAFMIGMFILY 651

  Fly   617 WYYADLEKKRCPEVSPMSALLNMNGTNDPNACIVWRRFSNLFETTQTLFWAVFGLIDLDSFELDG 681
            .||..      .:|:|                    .|:.:.|:.:||||::|||.::.|..|..
Zfish   652 SYYLG------AKVNP--------------------AFTTVEESFKTLFWSIFGLSEVSSVVLKY 690

  Fly   682 IKIFTRFWGMLMFGTYSVINIVVLLNLLIAMMNHSYQLISERADVEWKFARSKLWISYFEEGGTC 746
            ...|....|.:::|.|:|..:|||||:||||:|.|||.|.:.|||||||||||||:|||:.|.|.
Zfish   691 DHKFIENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDADVEWKFARSKLWLSYFDNGKTL 755

  Fly   747 PPPFNIIPTPKSIWYAIKWMRRVFCSGSSAARREHLK---------------TIRRKAQQASD-- 794
            ||||:|:|:|||.:..:|.:..:.     ..||..||               ...:.:.:.:|  
Zfish   756 PPPFSIVPSPKSFYLCVKRLVNLL-----RCRRRRLKKDVELGMDNSKSKLNLFTQSSMRMTDSH 815

  Fly   795 -------RDFKYQQIMRNLVRRYVTVEQRKAESQGVTEDDVNEIKQDISAFRCELVE 844
                   :..:|||||:.|::|||...|...|:..|.|.::.|||||||:.|.||:|
Zfish   816 SFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLE 872

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TrpgammaNP_001137830.2 trp 77..841 CDD:273311 324/830 (39%)
ANK repeat 118..147 CDD:293786 10/30 (33%)
ANK repeat 175..217 CDD:293786 20/54 (37%)
TRP_CaM_bind1 865..>891 CDD:467881
trpc3NP_001276813.2 trp 78..869 CDD:273311 327/850 (38%)
ANK repeat 128..159 CDD:293786 10/30 (33%)
ANK repeat 206..241 CDD:293786 18/34 (53%)
Blue background indicates that the domain is not in the aligned region.

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