DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtgo and Fndc3b

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:NP_775274.2 Gene:Fndc3b / 72007 MGIID:1919257 Length:1207 Species:Mus musculus


Alignment Length:1291 Identity:395/1291 - (30%)
Similarity:559/1291 - (43%) Gaps:247/1291 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   623 VPVQVPQYVN-ENGTLTHVMLSPQQYQ----QLHPGQGHLHPAPFISANGTSHFYTPVAGYPGPG 682
            :|:::|..:| |...:.|::......|    |::||:.....|    .:||.......|..|...
Mouse    11 IPLELPPLLNGEVAMMPHLVNGEAAQQVILVQVNPGETFTIRA----EDGTLQCIQGPAEVPMMS 71

  Fly   683 PAGNGPPHYHLPP----------------PPPPQQQQQQPPQQPQQQAPQGPPPPQQQQQQQQQV 731
            |.|:.|| .|:||                ...||..:..||..|...:|....||.         
Mouse    72 PNGSIPP-IHVPPGYISQVIEDSTGVRRVVVTPQSPECYPPSYPSAMSPTHHLPPY--------- 126

  Fly   732 APPAVQGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHT----------------HPQPHA 780
                                     .||     |.|...:|||                .||||.
Mouse   127 -------------------------LTH-----HPHFIQNSHTAYYPPVTVPGDMPPQFFPQPHL 161

  Fly   781 HSPHSPSPPN-YRDERSQRQHNKLLRKLEKQRESNPPHSPSPRRANELNGHNNNNIPPGVPLPGH 844
                   ||. |.:......:........:.:.|.|||.....|  :::..|..|.||..     
Mouse   162 -------PPTIYSEPEIIPLYGMSSYVTREDQYSKPPHKKLKDR--QIDRQNRLNSPPST----- 212

  Fly   845 LNNHHHAVNHQGRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRAGSSVGGASSVG-------TS 902
            :..:..|..:.|       .|:.|.                   .|||.||....|       |.
Mouse   213 IYKNSCATVYNG-------YGKGHS-------------------GGSSGGGGGGSGGGPGIKKTE 251

  Fly   903 EDGEDNSSLAGDDEEEYHRENSIIEQI-SAIEKPEVIDVTSRAAKIIWESPAIANTVTVDMR--- 963
            .....:...:..|.:||..|...::.| |.||||:|.::.:||..:.|..|       |.:.   
Mouse   252 RRARSSPKSSDSDLQEYELEVKRVQDILSGIEKPQVSNIQARAVVLSWAPP-------VGLSCGP 309

  Fly   964 ------QLRYQVLLCDSGKQCKYKSLYQGEAYECIVQDLQPGQDYLVRLQVHYQKLTGTVSDPTE 1022
                  ...|:|.|.|.|:..|||.:|.||..||.::||:|..||.||:...|..:.|:.|:|..
Mouse   310 HGGLSFPYSYEVALSDKGRDGKYKIIYSGEELECNLKDLRPATDYHVRVYAVYNSVKGSCSEPVS 374

  Fly  1023 FRTPPCEPDQPPPPKLVSRTKNSINLRWAAPAANGASIQHYLLEYDEG-RMPGQPQKFVELAKIK 1086
            |.|..|.|:.|.||||..|:|:|:.|:|.||..||:.|..||||:||| |..|..|.|..    .
Mouse   375 FTTHSCAPECPFPPKLAHRSKSSLTLQWKAPIDNGSKITSYLLEWDEGKRNSGFRQCFFG----S 435

  Fly  1087 AKHYVIGKLQPTTVYSFRLAAVNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSSLKLGWER 1151
            .||..:.||.|...|:|||||.|:.|.|.||......|.||.|.:|..|:|:.:..:.:.|.|.|
Mouse   436 QKHCKLTKLCPAMGYTFRLAARNDIGTSGYSQEVVCYTLGNIPQMPLAPRLVRAGVTWITLQWSR 500

  Fly  1152 RAQDG-------DFLLQLQDAETGHGFLNTYKGTELQTECLQLRRASSYQFRLRSENEAGFSPWS 1209
              .:|       .:.|.:|:.|....|...|.|.:|......|:|::.|:|||.:.|..|.|..|
Mouse   501 --PEGCSPEEVITYTLDIQEDENDSHFHPKYTGEDLTCTVKNLKRSTQYKFRLTASNMEGKSCPS 563

  Fly  1210 PEVSYRTLAERPGRPGKPHAKGKIHGTQFKARWDAPSDSGGAEILCYHLEL----SAAGPAFERI 1270
            ..:...|..:|||.|.:|..||.:....|..:||||.|:||:|||.|.||:    |.|| .:|..
Mouse   564 EVLVCTTSPDRPGPPTRPLIKGPVTSHGFSVKWDAPKDNGGSEILKYLLEITDGTSEAG-QWEVA 627

  Fly  1271 YSGAETEAMCERLQPGTTYALRACCEGPAGQSPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAAL 1335
            |||:.||.:...|:|||.|.|||||....|.|..|:...|.|.::.|....||.....|......
Mouse   628 YSGSATEYVFTHLKPGTLYKLRACCISTGGHSQCSESLPVRTLSLAPGQCRPPRVLGRPKHKGVH 692

  Fly  1336 LKLRPPEYNGGAPILEFEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRIGAG 1400
            |:...|....|..:.|:..:|...|.|...  ||.|.:......:|.||.:|..:|||:|..|.|
Mouse   693 LEWDVPASESGCEVSEYSVEMTEPENVASE--VYHGPELECTVGNLLPGTVYRFRVRALNDGGYG 755

  Fly  1401 SWSQWMRFTAAAAAPGVPEELRVLVKSATHLGVSWQPPLQENGAPVTSYTLKSASQERKEDDSEE 1465
            .:|.....|.||..||.....||.......:.|.|:.|... ||.::.|.|     |..||:...
Mouse   756 PYSDVSEITTAAGPPGQCRAPRVSFTPDGCVLVGWESPASP-GADISEYRL-----EWGEDEQSL 814

  Fly  1466 EVKEPPSSEFHNCYQGPQTCAELRNLSPYTRYHFRIQASNSAGTGNSSDVISVCTPAAVPG---- 1526
            |:          .|.||.||.|:|:|.|..:|..|:||.|.||.|..|:::...|||:.|.    
Mouse   815 EL----------VYHGPDTCFEMRDLLPAAQYCCRLQAFNPAGAGPYSELVHCQTPASAPDPVST 869

  Fly  1527 ------APQMQGYEFTAQEVTLNWTQPAAHGSPICSYNIEYGERTIATPDACTRYTVSGLMPETG 1585
                  .|.....:..:..:.|||.:|..:||.|.:|||:.|:..| |....|.:.:..|:|||.
Mouse   870 LCVLEEEPPSAHPDSPSVCLVLNWEEPCNNGSEILAYNIDLGDSCI-TVGNTTTHVMKNLLPETT 933

  Fly  1586 YKFRVQAVNAIGAGAFSAYAKLTTQPAPPAPPRLECSGAGHNYIKLKWGENGNGKVVNSNPSGNG 1650
            |:.|:||:|.||.|.||.:.|..|:|.||:||||||:.:|...:|||||:: |.|      :...
Mouse   934 YRIRIQAINEIGVGPFSQFIKAKTRPLPPSPPRLECAASGPQSLKLKWGDS-NSK------THAA 991

  Fly  1651 GDFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRAGDGDYSEEFVFETS 1715
            ||.. |.::: ..|.|:|.::|.|.:...||.:|.|.:.|:|||.|.:: ||:|.|||.:.|.|:
Mouse   992 GDMV-YTLQL-EDRNKRFISIYRGPSHTYKVQRLTEFTCYSFRIQAMSE-AGEGPYSETYTFSTT 1053

  Fly  1716 ATLPANIKPPRVVQ-EGSVCLMELPGQLGMQLTLEWQHSKNSFNDRVEYELQYAVLGAAELEGES 1779
            .::|..:|.|||.| ||:.|            .:.|:.......|.|.|.||..|          
Mouse  1054 KSVPPTLKAPRVTQLEGNSC------------EIFWETVPPMRGDPVSYVLQVLV---------- 1096

  Fly  1780 LSPKGRSSSSSGSSNGAPINLPNHDYRQLYRGPETKFTIDNLAAGTCYQFRVCPVR 1835
                ||.|                :|:|:|:|.|..|.|..|.:.|.|:||||..|
Mouse  1097 ----GRDS----------------EYKQVYKGEEATFQISGLQSNTDYRFRVCACR 1132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628 76/197 (39%)
FN3 1037..1124 CDD:238020 39/87 (45%)
FN3 <1149..1216 CDD:238020 20/73 (27%)
FN3 1221..1312 CDD:238020 43/94 (46%)
FN3 1334..1409 CDD:238020 21/74 (28%)
FN3 <1380..>1609 CDD:442628 81/238 (34%)
FN3 1619..1714 CDD:238020 35/94 (37%)
Fndc3bNP_775274.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 184..213 9/35 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 230..265 7/53 (13%)
FN3 283..377 CDD:238020 34/100 (34%)
FN3 382..473 CDD:238020 43/94 (46%)
FN3 481..570 CDD:238020 24/90 (27%)
FN3 <540..>799 CDD:442628 92/262 (35%)
FN3 <832..>1066 CDD:442628 91/244 (37%)
FN3 <1017..>1149 CDD:442628 51/159 (32%)

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