DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtgo and myom1a

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:NP_001154812.1 Gene:myom1a / 558671 ZFINID:ZDB-GENE-030131-2856 Length:1483 Species:Danio rerio


Alignment Length:966 Identity:195/966 - (20%)
Similarity:312/966 - (32%) Gaps:278/966 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   915 DEEE-------YHRENSIIEQISAIEKPEVIDVT-SRAAKIIWESPAIANTVTVDMRQLRYQ--- 968
            :|||       |..|..:....:.|:|   .||: .|..    |:.::..||.|.....|||   
Zfish   264 EEEELVERPHGYSPEYGVTFNTTIIDK---FDVSFGREG----ETMSLGCTVIVYPTVKRYQPEI 321

  Fly   969 ------VLLCDSGKQCKYKSL-YQGEAYECIVQDLQPGQDYLVRLQVHYQKLTGTVSDPTEFRTP 1026
                  |.|..|    |:..: :.||.....:..|....:.|..|:|:.:....|.|.....|..
Zfish   322 VWYRNGVALSSS----KWVHMHWSGEKATLTLVHLNKEDEGLYTLRVNTKSGFDTHSAYVFVRDA 382

  Fly  1027 PCEPDQPPPPKLVSR----TKNSINLRWAAPAANGAS-IQHYLLEYDE------GRMPGQPQKFV 1080
            ..|.:..|...|..|    .|:.:.:.|..||..|:| |..|.::..|      .:....|.|: 
Zfish   383 DVEEEGVPVAPLDVRCHDANKDYVVVTWKQPAVEGSSAITGYFIDRLEVGNHHWTQCNDTPVKY- 446

  Fly  1081 ELAKIKAKHYVIGKLQPTTVYSFRLAAVNEAGQSPYS----PVASYSTS-------GNPPP---- 1130
                  |:..|.|.::..: |.||:.|:|.||.|..|    ||.:...|       |...|    
Zfish   447 ------ARFPVTGLIEGRS-YMFRVRALNNAGVSRPSRVSDPVVAMDPSDRARLRAGPSAPWTGV 504

  Fly  1131 ------------VPKPPQLLA---SSSSSLKLGWERRAQDGDFLLQLQDAETGHGFLNTYKGTEL 1180
                        :|.||..||   ::.|.:.|.|:...|.|                  ::|...
Zfish   505 IKFTEEDPTVGVIPGPPTDLAVTEATKSYVVLSWKPPVQRG------------------HEGVMY 551

  Fly  1181 QTE-CL-----------------------QLRRASSYQFRLRSENEAGFSPWSPEVSYRTLAERP 1221
            ..| ||                       .|....||.||:||.|.||....|.|....|:.:|.
Zfish   552 YVEKCLVGTDAWQRVNTGIPVKSPRFALFDLAEDKSYTFRVRSCNSAGVGEPSEETGATTVGDRL 616

  Fly  1222 GRPGKPHAKGKIHGTQFKARWDAPSDSGGAEILCYHLELSAAGPAFERIYSGAETEAMCERLQPG 1286
            ..|..|.....|..|          ||  :.::|:                ||..|     ::..
Zfish   617 DLPSAPGPVIPIRNT----------DS--SVVVCW----------------GASKE-----VKDL 648

  Fly  1287 TTYALRACCEGPAGQSPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAALLKLRPPEYNGGAPILE 1351
            ..|.:....:|....:|                     |::.|.                     
Zfish   649 VGYYIEVTVDGSGVWAP---------------------CNNKPV--------------------- 671

  Fly  1352 FEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRI---GAGSWSQWMRFTAAAA 1413
                                |.|.||...|........:|:|:|..   |:.:.|:.....|:.|
Zfish   672 --------------------KGTRFVCHGLNATDKCTFRVKAVNAAGYSGSSAESEACLVKASIA 716

  Fly  1414 APGVPEELRVLVKSATHLGVSWQPPLQENGAPVTSYTLKSASQERKEDDSEEEVKEPPSSEFHNC 1478
            .|..|..:..|.:...::.:.||.|.:..||.:..|.|           ....||:..:|::|..
Zfish   717 VPSPPTGVTTLERLRDYMVIGWQAPAKTGGADIRGYYL-----------DYRTVKDGVTSKWHEL 770

  Fly  1479 YQGPQTCA--ELRNLSPYTRYHFRIQASNSAGTGNSSDVIS--VCT--PAAVPGAPQ-MQGYEFT 1536
            .....|.:  ::.:|.....|.|:::|.|.||...:|...:  .|.  ..||||.|. ::..|..
Zfish   771 NLKAVTSSPYKVTDLKENEFYQFQVRAFNQAGISEASIPTAPLECKEWTVAVPGPPHGLRVQEVR 835

  Fly  1537 AQEVTLNWTQPAAHG-SPICSYNIEYGE---RTIATPDACTRYT---VSGLMPETGYKFRVQAVN 1594
            ...:.:.|..|..:| ||:..|.:::.|   |.....:..|::|   ||||.....|:.|:.|.|
Zfish   836 KDSMVVLWEPPTFNGRSPVTGYYVDFKEENGRWRCVQERSTKHTYMKVSGLQEGISYRLRIHAKN 900

  Fly  1595 AIGAGAFSAYAKLTTQPAPPAPPRL--------------ECSGAGHNYIKLKWGENGNGKVVNSN 1645
            ..|.|..|...........|....:              |||....: .:..|.:|......:|.
Zfish   901 LAGVGVPSKATDAILAETRPGTNEIVVDVDDNGVISLIFECSDLKED-SQFVWSKNYEAFTDSSR 964

  Fly  1646 PS--GNGGDFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRAGDGDYSE 1708
            .:  ..||.....|.:..:.....:..|.:.|:.:...:.|.|.........:|..:.....:..
Zfish   965 LTIQTTGGKSRAIFNDPSLDDLGIYSCVVTNTDGVSASYTLTEEGLKRLLDISHDHQFPIIPFKS 1029

  Fly  1709 EFVFETSATLPANIKPPRVVQEGSVCLMELPGQLGMQLTLEWQHSKNSFNDRVEYE 1764
            |...|             :.::|.|......|:....|.:|:     .|||.|.:|
Zfish  1030 EMAIE-------------LQEKGRVRFWAEVGKFTSNLQVEY-----VFNDNVIHE 1067

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628 52/213 (24%)
FN3 1037..1124 CDD:238020 27/101 (27%)
FN3 <1149..1216 CDD:238020 19/90 (21%)
FN3 1221..1312 CDD:238020 13/90 (14%)
FN3 1334..1409 CDD:238020 10/77 (13%)
FN3 <1380..>1609 CDD:442628 59/245 (24%)
FN3 1619..1714 CDD:238020 15/110 (14%)
myom1aNP_001154812.1 Ig 167..260 CDD:472250
Ig strand B 184..188 CDD:409353
Ig strand C 197..201 CDD:409353
Ig strand E 225..229 CDD:409353
Ig strand F 239..244 CDD:409353
Ig strand G 252..255 CDD:409353
FN3 307..811 CDD:442628 129/639 (20%)
FN3 823..914 CDD:238020 25/90 (28%)
Ig 936..1006 CDD:472250 11/70 (16%)
Ig strand C 949..953 CDD:409353 0/3 (0%)
Ig strand E 974..978 CDD:409353 0/3 (0%)
Ig strand F 988..993 CDD:409353 0/4 (0%)
Ig 1381..1472 CDD:472250
Ig strand B 1399..1403 CDD:319300
Ig strand C 1412..1416 CDD:319300
Ig strand E 1438..1442 CDD:319300
Ig strand F 1452..1457 CDD:319300
Ig strand G 1465..1468 CDD:319300
Blue background indicates that the domain is not in the aligned region.

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