DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtgo and mybpha

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:XP_017209018.1 Gene:mybpha / 393530 ZFINID:ZDB-GENE-040426-1531 Length:527 Species:Danio rerio


Alignment Length:495 Identity:109/495 - (22%)
Similarity:156/495 - (31%) Gaps:161/495 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1411 AAAAPGVPEELRVLVKSATHLGVSWQPPLQENGAPVTSYTLKSASQERKEDDSEEEVKEPPSSEF 1475
            ||.|| |||...|....|.      .||: |..||        |:.|......|..|.|.|:.|.
Zfish    23 AAPAP-VPETAPVEAPPAE------DPPV-EAAAP--------AAVEETTPAPEAPVAEGPAEET 71

  Fly  1476 HNCYQGPQTCAELRNLSPYTRYHFRIQASNSAGTGNSSDVISVCTPAAVPGAPQ-MQGYEFTAQE 1539
            ......|   ||.....|..     ::....|.|..        .||..|.||| :...:.....
Zfish    72 APAADAP---AEAAPAEPAP-----VEEPPKAPTPP--------PPAVPPSAPQGLSVDDVNDTS 120

  Fly  1540 VTLNWTQPAAHGSPICSYNIEY-----GERTIATPDACT--RYTVSGLMPETGYKFRVQAVNAIG 1597
            |||.|..|...||.:..|.:||     .|..:|..:..|  |:.:.||........||.||||.|
Zfish   121 VTLKWRSPENIGSGLDGYAVEYCKEGSSEWVVANTELVTSNRHAIRGLTTGDMLNIRVVAVNAGG 185

  Fly  1598 AGAFSAYAKLTTQPAPPAP----PRLECSGA-GHNYIK-------------------LKWGENG- 1637
                .:...:..||.|...    ||:....| ...||:                   :.|.:|| 
Zfish   186 ----RSEPVVLPQPIPVREVMDRPRIRMPRALRSKYIRHAGEQINLVIPFSGKPKPVISWTKNGQ 246

  Fly  1638 --NGKVVNSNPSGNGGDFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDR 1700
              :.|.||...|                                      ::.|..|...|..|.
Zfish   247 PLDTKKVNVRNS--------------------------------------DKDSILFIRKAERDD 273

  Fly  1701 AGDGDYSEEF-VFETSATLPANIKPPRVVQEGSVCLMELPG---------QLGMQLTLEWQHSKN 1755
            :|..:.|.:. .||...||        ::|     :::|||         ..|....|||...|:
Zfish   274 SGSYEMSVKVDSFEDKTTL--------IIQ-----IVDLPGPPVSVKLVDSWGFNAALEWTPPKD 325

  Fly  1756 SFNDRVEYELQYAVLGAAELEGESLSPKGRSSSSSGSSNGAPINLPNHDYRQLYRGPETKFTIDN 1820
            :.|..:   ..|.|..|.:..||..:                  :..|.:|       ...|:.:
Zfish   326 NGNTEI---TGYTVQKADKKTGEWFT------------------VLEHFHR-------LNVTVTD 362

  Fly  1821 LAAGTCYQFRVCPVRIAAGGE-LLYGQPSSPLRYQVPSEL 1859
            |..|..|.|||....:....| ....:.::.::..||:|:
Zfish   363 LVMGNVYTFRVFSENMVGRSETAAVTKDAARIKKTVPAEV 402

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628
FN3 1037..1124 CDD:238020
FN3 <1149..1216 CDD:238020
FN3 1221..1312 CDD:238020
FN3 1334..1409 CDD:238020
FN3 <1380..>1609 CDD:442628 56/205 (27%)
FN3 1619..1714 CDD:238020 17/118 (14%)
mybphaXP_017209018.1 FN3 109..190 CDD:238020 24/84 (29%)
Ig_Titin_like 217..296 CDD:409406 20/129 (16%)
Ig strand A 217..220 CDD:409406 2/2 (100%)
Ig strand B 225..231 CDD:409406 0/5 (0%)
Ig strand C 237..243 CDD:409406 1/5 (20%)
Ig strand D 254..259 CDD:409406 2/42 (5%)
Ig strand E 260..266 CDD:409406 1/5 (20%)
Ig strand F 275..283 CDD:409406 2/7 (29%)
Ig strand G 286..296 CDD:409406 5/22 (23%)
FN3 300..383 CDD:238020 22/110 (20%)
I-set 426..515 CDD:400151
Ig strand B 443..447 CDD:409353
Ig strand C 456..460 CDD:409353
Ig strand E 481..485 CDD:409353
Ig strand F 495..500 CDD:409353
Ig strand G 508..511 CDD:409353
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.