DRSC/TRiP Functional Genomics Resources

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Protein Alignment mtgo and Trim9

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:NP_001188786.1 Gene:Trim9 / 34453 FlyBaseID:FBgn0051721 Length:740 Species:Drosophila melanogaster


Alignment Length:497 Identity:102/497 - (20%)
Similarity:156/497 - (31%) Gaps:153/497 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly  1450 TLKSASQERKEDDSEEEVKEPPSSEFHNCYQG-----PQTCAELRNL----------SPYTRYHF 1499
            |.|:...|...:..:...|...::||....:|     .::|.|...|          :.:.|..:
  Fly   294 TCKAQKTELSHNLQQLSEKARSTTEFIQRLKGMSDKVTESCMEFERLVHAQCEALIQAIHDRREY 358

  Fly  1500 RIQA----------------SNSAG-TGNSSDVISVCTPA--AVPGAPQMQGYEFTAQEVT---L 1542
            .::|                ||..| ...::.:|..|..|  ....|..:|........||   :
  Fly   359 LLEAIRMDKDTKIRILKDQQSNCTGKLQQTTGLIQFCIEALKETDSAAFLQVGSMLINRVTNTDM 423

  Fly  1543 NWTQPAAHGSPICSYNIEYGERTIATPDACTRYTVSGLMPETGYKFRVQAVNAIGAGAFSAYAKL 1607
            .|.|...:.:|..|..::     :...||.....:..|        ....:.|:..|....    
  Fly   424 TWHQEVTNAAPRVSPIVD-----LTLDDAALARAIDNL--------NFIQMRAVKDGDERC---- 471

  Fly  1608 TTQPAPPAPPRL---ECSGAGHNYIKLKWGENGNGKVVNSNPSGNGGDFTKYFVEMYV-----AR 1664
               ||.|..|.:   :|| |.:|.:.:.|           .|..:.      |||.||     ..
  Fly   472 ---PAAPMTPTILPSDCS-AENNSVTVAW-----------QPPNHS------FVEGYVLELDDGS 515

  Fly  1665 AKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRAGDGDYSEEFVFETSATLPANIKPPRVVQ 1729
            ..:|:.||.|...:|.|..|...|.|..|:.|. :.||:|:|||....:|:........|     
  Fly   516 GGEFREVYCGKETICTVDGLHFNSMYNARVKAF-NSAGEGEYSELIGLQTAEVAWFTFDP----- 574

  Fly  1730 EGSVCLMELPGQLGMQLTLEWQHSKNSFNDRVEYELQYAVLGAAELEGESLSPKGRSSSSSGSSN 1794
                   .|.|..|..|..    |||:....||.......||                 |.|.|.
  Fly   575 -------VLSGGAGSGLIF----SKNNATVSVEGWEHRVALG-----------------SVGFSR 611

  Fly  1795 GAPINLPNHDYRQLYRGPETKFTIDNLAAGTCYQFRVCPVRIAAGGELLYGQPSSPLRYQVPSEL 1859
            |.      |.:         :|||||..|.|...|.|..:.:|....|  |:........:..: 
  Fly   612 GV------HYW---------EFTIDNYTADTDPAFGVARIDVARNKML--GKDEKSFAMYIDRQ- 658

  Fly  1860 DPSSATCHHHLHGSTATPAMASSQRSSRKLSAG--NGSTNGL 1899
              .|...|:.:|              .|::..|  .|||.|:
  Fly   659 --RSWFQHNSIH--------------ERRVEGGITTGSTIGV 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628
FN3 1037..1124 CDD:238020
FN3 <1149..1216 CDD:238020
FN3 1221..1312 CDD:238020
FN3 1334..1409 CDD:238020
FN3 <1380..>1609 CDD:442628 31/195 (16%)
FN3 1619..1714 CDD:238020 28/102 (27%)
Trim9NP_001188786.1 RING-HC_TRIM9-like_C-I 2..>35 CDD:438238
Bbox1_TRIM9-like_C-I 199..244 CDD:380861
Bbox2_TRIM9-like 255..291 CDD:380822
CC_brat-like 298..420 CDD:475168 19/121 (16%)
FN3 472..564 CDD:238020 32/110 (29%)
SPRY_PRY_TRIM67_9 561..735 CDD:293947 39/191 (20%)
Blue background indicates that the domain is not in the aligned region.

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