DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtgo and Fndc3c1

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:NP_001007581.1 Gene:Fndc3c1 / 333564 MGIID:2685630 Length:1356 Species:Mus musculus


Alignment Length:1437 Identity:399/1437 - (27%)
Similarity:576/1437 - (40%) Gaps:349/1437 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   605 RGPA-VQMVSQ--NRPPPPMPVPVQVPQYVNENGTLTHVMLSPQQYQQLHPGQGHLHPAPFISAN 666
            :||| |.:::.  |.||..:| |..:.|.|.||| :..:::.||......|....:. .||::| 
Mouse    89 QGPADVPLIAPTGNLPPIYLP-PGYMSQVVEENG-IQKIVIVPQTLDYHVPMTAPVQ-QPFVAA- 149

  Fly   667 GTSHFYTPVAGYPGPGPAGNGPPHYHLPPPPPPQQQQQQPP------------------QQPQQQ 713
                   |:..||........|....:|.|...|:.||.||                  |:..:.
Mouse   150 -------PLLTYPQAPQLLYSPVQGEIPVPSYIQEPQQIPPLPLLPPLPLLPPAATFLFQEHLET 207

  Fly   714 APQG-------------------------------------------------PPPPQQQQQQQQ 729
            .|||                                                 |.||       .
Mouse   208 YPQGRVNHNQFDERTVKIGEYSKKKIRDRQLGEHKINSTFSDTTLLLNKDIDMPAPP-------D 265

  Fly   730 QVAPPAVQGAPSTGSVGAA---------------QGAP-----------ATATATHTHAHSHSHS 768
            .:.|..|..||.|.:..:.               ..||           .|.|.|.:.||:.|.|
Mouse   266 SLCPYTVDTAPGTNTDNSTSDTYSLNTVLNTCTIDSAPRNMADNIPDTNTTDTITSSSAHTPSIS 330

  Fly   769 HAHSHTHPQPHAHSPHSPSPPNYR----DERSQRQHNKLLRKLEKQRESNPPHSPSPRRANELNG 829
            .::: |....:.::....|..||.    ||..:....|.:.....|..|||..|.        |.
Mouse   331 TSNA-TFCSDNNNNITDSSISNYNQVTYDETHKPPDAKSIPSCTSQSASNPSVSE--------NA 386

  Fly   830 HNNNNIPPGVPLPGHL-----NNHHHAVNHQGRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRA 889
            ||.::|..|: .|..:     |:|.....:.|       .|...|:..:.|.::::         
Mouse   387 HNPSSINDGL-RPSDVASISENDHEETEANMG-------AGDNKQILGENQKKSQS--------- 434

  Fly   890 GSSVGGASSVGTSEDGEDNSSLAGDDEEEYHRENSIIEQISAIEKPEVIDVTSRAAKIIW----- 949
                             .|:||     :|::.|:........||||.|.::.:|:|.:.|     
Mouse   435 -----------------SNASL-----KEHNTEDRTQPGCFNIEKPVVSNIQTRSATVSWTRKSN 477

  Fly   950 ESPAIANTVTVDMRQLRYQVLLCDSGKQCKYKSLYQGEAYECIVQDLQPGQDYLVRLQVHYQKLT 1014
            |...|.:::|       :::.|..:||...||::|.|.....::.||||...|.:|:........
Mouse   478 EKYDINSSMT-------HELALSSNGKNGTYKNIYTGNGVTVVLHDLQPCMVYFLRVTTIRNAEH 535

  Fly  1015 GTVSDPTEFRTPPCEPDQPPPPKLVSRTKNSINLRWAAPAANGASIQHYLLEYDEGRMPGQPQKF 1079
            .:||:...|.||.||||.|..|.|:||||||::|:|.|...||:.|..:|||:|||:    .:.|
Mouse   536 RSVSEVVSFTTPGCEPDPPLAPTLISRTKNSLSLQWKASNDNGSKISSFLLEWDEGK----GEDF 596

  Fly  1080 VELAKIKAKHYVIGKLQPTTVYSFRLAAVNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSS 1144
            ......:.|.:.:.||.|:|.|||||||.|:.|.|.:|..|.:.|||..||.|.||:|..:...|
Mouse   597 KSCYSGRLKQHKLFKLNPSTKYSFRLAAKNDFGCSNFSETAVFYTSGKTPPAPLPPKLKEAGIYS 661

  Fly  1145 LKLGW--ERRAQDGD---FLLQLQDAETGHGFLNTYKGTELQTECLQLRRASSYQFRLRSENEAG 1204
            |.|.|  .......|   ::|::::|::|.||...|.|.:|......|:|.:.|:||:.:.|..|
Mouse   662 LSLEWCAPTNPNPNDTLTYVLEMEEAKSGLGFKPKYNGEDLTCTIRNLQRNTMYKFRIFAYNLEG 726

  Fly  1205 FSPWSPEVSYRTLAERPGRPGKPHAKGKIHGTQFKARWDAPSDSGGAEILCYHLEL---SAAGPA 1266
            .|..|.||.|.|...|||.|.||:..|.||..|....||.|.|:||..|..|.||:   |.:...
Mouse   727 RSNPSGEVKYTTRPARPGCPNKPYVVGTIHAHQVTIGWDLPKDNGGMNISSYSLEVCENSDSANL 791

  Fly  1267 FERIYSGAETEAMCERLQPGTTYALRACCEGPAGQSPYSDIGHVTTEAVPPSAPPPPHCSDPP-- 1329
            ::.||||...|.:.:.||..|||.||..|..|||||..||:..:.|..:||.:     |...|  
Mouse   792 WKIIYSGTRQEFLYDDLQAATTYKLRVFCTSPAGQSRPSDVLTIQTPTLPPES-----CRSQPLR 851

  Fly  1330 ----SPYAALLKLRPPEYNGGAPILEFEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQ 1390
                |..|.|...|  ..||                  .|:...|||:.....||      .:..
Mouse   852 GKTKSKDANLPDNR--SVNG------------------KPEAHVRGKKAKGPHQD------RKVH 890

  Fly  1391 VRAINRIGAGSWSQWMRFTAAAAAP---GVPEELRVLV-KSATHLGVSWQPPLQENGAPVTSYTL 1451
            ..:..:...||.|.......|...|   |.|    ||. |..|.:.|||:.| :.|||.:..|.|
Mouse   891 PSSEKKCALGSQSMECGSVPARHPPSQCGTP----VLTCKGPTCVIVSWEIP-KCNGAEIIDYRL 950

  Fly  1452 KSASQERKEDDSEEEVKEPPSSEFHNCYQGPQTCAELRNLSPYTRYHFRIQASNSAGTGNSSDVI 1516
                |..:.:||           .|..|.||....|::.|.|.|.|..|:||.|..|.|......
Mouse   951 ----QWGQVEDS-----------MHLIYTGPCLRYEVKGLVPATTYFCRVQAVNIVGVGMFGGTA 1000

  Fly  1517 SVCTPAAVPG-APQMQGYE------FTAQEVTLNWTQPAAHGSPICSYNIEYGERTIATPDACTR 1574
            .|.||..||. .|.::..|      .::..:.:.|.:|..|||||..||||||::.:.|....|.
Mouse  1001 KVTTPGTVPAMVPVLKEVESKVPAKLSSTCIAIRWEEPDCHGSPITGYNIEYGDKKVVTVKRITE 1065

  Fly  1575 YTVSGLMPETGYKFRVQAVNAIGAGAFSAYAKLTTQPAPPAPPRLECSGAGHNYIKLKWGENGNG 1639
            |.:..|.|.|.|:.|:||:|..|...||...:..|:|.||.||:|.|...||..::||||...:.
Mouse  1066 YVLKDLQPNTTYRIRIQAINHYGLSPFSPSIRCKTKPLPPEPPQLNCVVYGHQSLRLKWGTVSSK 1130

  Fly  1640 KVVNSNPSGNGGDFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRAGDG 1704
            |.:        .:|..|.|.| ..|:.:|..:|.|.:...||.||.|.:.|.|:|.| .:.||:|
Mouse  1131 KTL--------ANFINYNVLM-EDRSGRFSVIYRGPDVTHKVQKLSEYTEYKFKIQA-CNEAGEG 1185

  Fly  1705 DYSEEFVFETSATLPANIKPPRVVQEGSVCLMELPGQLGMQLTLEWQHSKNSFNDRVEYELQYAV 1769
            ..|:.:.|.|:.:.|..:|.|:|                        |..|:             
Mouse  1186 PESDIYTFTTTKSPPTALKAPKV------------------------HPLNN------------- 1213

  Fly  1770 LGAAELEGESLSPKGRSSSSSGSSNGAPI-----NLPNHDYRQLYRGPETKFTIDNLAAGTCYQF 1829
             .:.|::.|||.|          ..|.||     ........|:|:||.|.|:..|..|.:.|:|
Mouse  1214 -NSCEIKWESLEP----------IKGDPIVYCLQVTTGKKANQIYKGPNTSFSFSNYHANSRYRF 1267

  Fly  1830 RVCPVR---IAAGGELLYGQPSSPLRYQVPSELDPSSATCHHHLHGSTATPAMASSQRSSRKLSA 1891
            :||..|   .:.|.:.|:|..|       ||.|  .|...||..||           :.|.....
Mouse  1268 KVCAGRRYETSNGLQELWGPYS-------PSAL--FSTYKHHSGHG-----------KGSGSKGK 1312

  Fly  1892 GNGSTNG 1898
            ||.:..|
Mouse  1313 GNHNDKG 1319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628 68/192 (35%)
FN3 1037..1124 CDD:238020 37/86 (43%)
FN3 <1149..1216 CDD:238020 22/71 (31%)
FN3 1221..1312 CDD:238020 40/93 (43%)
FN3 1334..1409 CDD:238020 13/74 (18%)
FN3 <1380..>1609 CDD:442628 73/239 (31%)
FN3 1619..1714 CDD:238020 31/94 (33%)
Fndc3c1NP_001007581.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 303..341 9/38 (24%)
FN3 337..>764 CDD:442628 145/484 (30%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 356..402 14/54 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 428..452 6/54 (11%)
FN3 551..641 CDD:238020 41/93 (44%)
FN3 661..738 CDD:238020 25/76 (33%)
FN3 <708..>844 CDD:442628 57/135 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 825..894 22/99 (22%)
FN3 915..1004 CDD:238020 35/108 (32%)
FN3 <970..>1202 CDD:442628 84/241 (35%)
FN3 1200..1296 CDD:238020 34/152 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1299..1320 8/32 (25%)

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