DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtgo and Fndc3a

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:NP_997519.2 Gene:Fndc3a / 319448 MGIID:1196463 Length:1198 Species:Mus musculus


Alignment Length:1342 Identity:404/1342 - (30%)
Similarity:599/1342 - (44%) Gaps:280/1342 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   606 GPA-VQMVSQNRPPPPMPVPV-QVPQYVNENGTLTHVMLSPQQYQQLHPGQGH--LHPAPFISAN 666
            ||| |.|:|.|...||:.||. ..||.:.:|| :..|::.||. .:.||| ||  :|.:|     
Mouse    59 GPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNG-VRRVVVVPQS-PEFHPG-GHTVIHRSP----- 115

  Fly   667 GTSHFYTPVAGYPGPGPAGNGPPHYHLPPPPPPQQQQQQPPQQPQQQAPQGPPPPQQQQQQQQQV 731
                 :.|:.|:              :|.|                  ...||||:...      
Mouse   116 -----HPPLPGF--------------IPVP------------------TMMPPPPRHMY------ 137

  Fly   732 APPAVQGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHTHPQPHAHSPHSPSPPNYRDERS 796
                   :|.||:     |..||         .:...:..|..:....|||.|..|  |:|||||
Mouse   138 -------SPVTGA-----GDMAT---------QYMPQYQSSQVYADVDAHSTHGRS--NFRDERS 179

  Fly   797 QRQHNKLLRKL------EKQRESNPPHSPSPRRANELNGHNNNNIPPGVPLPGHLNNHHHAVNHQ 855
            .:.:.:|.:||      :|.:.|:||  |||::.                 |..::.|:..:..|
Mouse   180 SKTYERLQKKLKDRQGTQKDKMSSPP--PSPQKC-----------------PSPISEHNGLIKGQ 225

  Fly   856 GRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRAGSSVGGASSVGTSEDGEDNSSLAGDDE-EEY 919
                                               ::.||.:....:..|...|....|.| ||.
Mouse   226 -----------------------------------NASGGNTGSARNRSGRGRSCTQVDPEMEEK 255

  Fly   920 HRENSIIEQ-ISAIEKPEVIDVTSRAAKIIWESPA------IANTVTVDMRQLRYQVLLCDSGKQ 977
            ..|....|. :|.|.||...|:.:|...:.|..|:      :..|...::  ..|:||:..:||:
Mouse   256 DEETKAFEAFLSNIVKPVASDIQARTVLLTWSPPSSFINGEVNETAVPEL--FNYEVLVSSTGKE 318

  Fly   978 CKYKSLYQGEAYECIVQDLQPGQDYLVRLQVHYQKLTGTVSDPTEFRTPPCEPDQPPPPKLVSRT 1042
            .||:|:|.||.....:.||:|..||..::|.....:.|..|:...|.|..||||.|..|::.:||
Mouse   319 GKYRSVYIGEETSVTLNDLKPATDYHAKVQAESNSIKGIPSEAESFTTLSCEPDPPNAPRIANRT 383

  Fly  1043 KNSINLRWAAPAANGASIQHYLLEYDEGRMPGQPQKFVELAKIKAKHYVIGKLQPTTVYSFRLAA 1107
            |||:.|:|.||:.||:.||.::||:|||:..|:   |.:......|.:.|.||.|.....|||:|
Mouse   384 KNSLTLQWKAPSDNGSKIQSFILEWDEGKGNGE---FCQCYMGSQKQFKITKLSPAMGCKFRLSA 445

  Fly  1108 VNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSSLKLGWER----RAQDG-DFLLQLQDAET 1167
            .|:.|.|.:|....|.|||..|.||..|.|..:..:.|.|.|.:    .:.:| .::|::::..:
Mouse   446 KNDYGVSDFSEEVLYYTSGCAPSVPASPVLTKAGVTWLSLQWTKPSGTPSDEGISYILEMEEETS 510

  Fly  1168 GHGFLNTYKGTELQTECLQLRRASSYQFRLRSENEAGFSPWSPEVSYRTLAERPGRPGKPHAKGK 1232
            |:||...|.|.:|......|||::.|:|::.:.|..|.|..|..|.:.|..::||.|.||..|||
Mouse   511 GYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFSTCPDKPGVPVKPSVKGK 575

  Fly  1233 IHGTQFKARWDAPSDSGGAEILCYHLELS--AAGPAFERIYSGAETEAMCERLQPGTTYALRACC 1295
            ||...||..||.|.|:|||.|..|.:|::  :.|..::.||||...|.:|:||.||..|.||..|
Mouse   576 IHSHGFKITWDPPKDNGGAPINKYVVEMAEGSNGNKWDMIYSGTTREHLCDRLTPGCYYRLRVYC 640

  Fly  1296 EGPAGQSPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAALLKLRPPEYNGGAPILEFEAQMRRLE 1360
            ....|||..|:...|.|.||||....||.....|......|:..||:.:||:||..:..:|...:
Mouse   641 ISDGGQSAVSESLLVQTPAVPPGPCLPPRLQGRPKAKEIQLRWGPPQVDGGSPISCYAVEMTPAD 705

  Fly  1361 QVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRIGAGSWSQWMRFTAAAAAPGVPEELR--- 1422
            :.:|.. ||:|.:.......|.||..|..::||.||||.|.:|:....|   .|||.|::.|   
Mouse   706 KDEPRD-VYQGSEVECTVGSLLPGKTYSFRLRAANRIGFGPFSEKYDIT---TAPGPPDQCRPPQ 766

  Fly  1423 VLVKSATHLGVSWQPPLQENGAPVTSYTLKSASQERKEDDSEEEVKEPPSSEFHNCYQGPQTCAE 1487
            |..:|||...|:|:.|| .||..||.|.|:....|               .....||.||....|
Mouse   767 VTCRSATCAQVNWEIPL-SNGTDVTEYRLEWGGVE---------------GSMQMCYCGPGLSCE 815

  Fly  1488 LRNLSPYTRYHFRIQASNSAGTGNSSDVISVCTPAAVPGAPQMQGYEFTAQEVT----------- 1541
            |:.|||.|.|:.|:||.:..|.|..|:|::..||.:||....      ..||::           
Mouse   816 LKGLSPATTYYCRVQAMSVVGAGPFSEVVACVTPPSVPAIVT------CLQEISDDDIEYPHYSP 874

  Fly  1542 -----LNWTQPAAHGSPICSYNIEYGERTIATPDACTRYTVSGLMPETGYKFRVQAVNAIGAGAF 1601
                 ::|.:|..|||.|.:|:|:.|::...|....|.|.:..|.|:|.|:.|:||:|::|||.|
Mouse   875 STCLAISWKEPYDHGSEILAYSIDLGDKQPLTVGKMTSYIIDSLQPDTTYRIRIQALNSLGAGPF 939

  Fly  1602 SAYAKLTTQPAPPAPPRLECSGAGHNYIKLKWGENGNGKVVNSNPSGNGGDFTKYFVEMYVARAK 1666
            |...||.|:|.||.||||||....|..:|||||| |..|.:::       |..:|.::| ..|..
Mouse   940 SHTIKLKTKPLPPDPPRLECVAFNHQNLKLKWGE-GTPKTLST-------DAVQYHLQM-EDRNG 995

  Fly  1667 QFQAVYSGTNCMCKVHKLQERSSYTFRIYAHTDRAGDGDYSEEFVFETSATLPANIKPPRVVQ-E 1730
            :|.::|.|.....||.:|.|.:||.|.|.| .:.||:|..|:|:||.|..:|||.:|.|::.: .
Mouse   996 RFVSLYRGPCHTYKVQRLSESTSYKFCIQA-CNEAGEGPLSQEYVFTTPKSLPAALKAPKIEKIN 1059

  Fly  1731 GSVCLMELPGQLGMQLTLEWQHSKNSFNDRVEYELQYAVLGAAELEGESLSPKGRSSSSSGSSNG 1795
            ..:|            .:.|::.:....|.|.|.||..|              |:.|        
Mouse  1060 DHIC------------EITWEYLQPMKGDPVIYNLQVMV--------------GKDS-------- 1090

  Fly  1796 APINLPNHDYRQLYRGPETKFTIDNLAAGTCYQFRVCPVRIAAGGELLYGQPSSPLRYQVPSELD 1860
                    :::|:|:||:|.|...:|.....|:||||.:|...                     |
Mouse  1091 --------EFKQIYKGPDTSFRYSSLQLNCEYRFRVCAIRQCQ---------------------D 1126

  Fly  1861 PSSATCHHHLHGSTATPAMASSQRSSRKLSAGNGSTNGLHMR 1902
            |   |.|..|.|..:|.....|||:....|:...|.:....|
Mouse  1127 P---TGHQDLVGPYSTTVFFISQRTEPPASSNKDSVDSARTR 1165

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628 66/193 (34%)
FN3 1037..1124 CDD:238020 34/86 (40%)
FN3 <1149..1216 CDD:238020 19/71 (27%)
FN3 1221..1312 CDD:238020 42/92 (46%)
FN3 1334..1409 CDD:238020 24/74 (32%)
FN3 <1380..>1609 CDD:442628 84/247 (34%)
FN3 1619..1714 CDD:238020 35/94 (37%)
Fndc3aNP_997519.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 188..257 20/122 (16%)
FN3 <274..>620 CDD:442628 123/350 (35%)
FN3 678..754 CDD:238020 25/79 (32%)
FN3 756..848 CDD:238020 37/107 (35%)
FN3 <818..>1096 CDD:442628 104/335 (31%)

Return to query results.
Submit another query.