DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mtgo and fndc3a

DIOPT Version :10

Sequence 1:NP_001137829.1 Gene:mtgo / 34987 FlyBaseID:FBgn0259735 Length:2064 Species:Drosophila melanogaster
Sequence 2:XP_073780331.1 Gene:fndc3a / 100333097 ZFINID:ZDB-GENE-030131-7015 Length:1249 Species:Danio rerio


Alignment Length:1429 Identity:415/1429 - (29%)
Similarity:617/1429 - (43%) Gaps:315/1429 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   540 PSPVTNVNGNIAQAAAAAASAPRLLLQL---DAATVQQQQQQQHQQQQQHQQQQQQQIVAAGKRS 601
            |.|...|||:..|..        :|:|:   :|.|:|:...|                      .
Zfish    29 PHPANIVNGDGPQQV--------ILVQVNPGEAFTIQRDDGQ----------------------F 63

  Fly   602 KVYRGPA-VQMVSQNRPPPPMPVPV-QVPQYVNENGTLTHVMLSPQQYQQLHPG-QGHLHPAPFI 663
            :...||| |.|:|.|...|.:.||. .|.|.:.||| :..|::.||  .:.||| ...||.||  
Zfish    64 QCITGPAQVPMMSPNGSVPQIYVPPGYVQQIIEENG-VRRVLVLPQ--TEFHPGAHSPLHHAP-- 123

  Fly   664 SANGTSHFYTPVAGYPGPGPAGNGPPHYHL----PPP----PPPQQQQQQPPQQPQQQAPQGPPP 720
                          :|        |||.||    |.|    |||...                  
Zfish   124 --------------HP--------PPHTHLQAFIPHPHIMHPPPHLY------------------ 148

  Fly   721 PQQQQQQQQQVAPPAVQGAPSTGSVGAAQGAPATATATHTHAHSHSHSHAHSHTHPQPHAHSPHS 785
                                 :|..|.....|...:..|.   :|...::...||||      |.
Zfish   149 ---------------------SGLAGGTGDIPQYISQYHP---AHPAIYSEQETHPQ------HG 183

  Fly   786 PSPPNYRDERSQRQHNKLLRKLEKQR------------ESNPPHSPSPRRANELNGHNNNNIPPG 838
            .:...:||||:.:.:.:|.:||:.::            :.:||  |||::        |...|| 
Zfish   184 RAAFAHRDERTCKTYERLQKKLKDKQGVGGGGGGLALSKDSPP--PSPQK--------NLGTPP- 237

  Fly   839 VPLPGHLNNHHHAVNHQGRRLPQQHQGQAHQVAQQQQSQARNGNPQHPQRAGSSVGGASSVGTSE 903
            ....|.|.|     ..:|:          ..|.|.|.|....       |.|.|......|   |
Zfish   238 AGAAGELQN-----GLEGK----------SNVDQAQPSNTIT-------RLGKSPVRKKEV---E 277

  Fly   904 DGEDNSSLAGDDEEEYHRENSIIEQISAIEKPEVIDVTSRAAKIIWESPAIANTVTVDMRQ---- 964
            .||       .|||    ..::.|:::::.||.|.::.:|.|.:.|.||  :.|...|..:    
Zfish   278 PGE-------LDEE----AKALQERLNSMCKPVVTNIQARGASLTWVSP--SRTEGDDEPKEGED 329

  Fly   965 ------LRYQVLLCDSGKQCKYKSLYQGEAYECIVQDLQPGQDYLVRLQVHYQKLTGTVSDPTEF 1023
                  ..|:|.:..:||..||||.|.|......:|||:|..||.||:|.....|.|..|:...|
Zfish   330 EPVEPNFTYEVSISYNGKDGKYKSAYSGVELSATLQDLRPATDYHVRVQATCNCLQGVPSEAVSF 394

  Fly  1024 RTPPCEPDQPPPPKLVSRTKNSINLRWAAPAANGASIQHYLLEYDEGRMPGQPQKFVELAKIKAK 1088
            .|..||||.|.||:.:|.||:|:.|:|.||..||:.||:|:|.:|||:  |....||:......|
Zfish   395 TTLSCEPDTPSPPRKLSGTKSSLVLQWKAPCDNGSKIQNYILHWDEGK--GTDATFVQCYYGPYK 457

  Fly  1089 HYVIGKLQPTTVYSFRLAAVNEAGQSPYSPVASYSTSGNPPPVPKPPQLLASSSSSLKLGWERRA 1153
            .|.:.||...:.|||||||.|:.|.|.:|.|.:..||.:.|..|..|:|:.|..:.|.:.|.|.|
Zfish   458 QYRLTKLSTASRYSFRLAAKNDMGVSEFSEVVNIMTSCSVPAPPLSPELVQSGVTWLCIRWHRPA 522

  Fly  1154 -----QDGDFLLQLQDAETGHGFLNTYKGTELQTECLQLRRASSYQFRLRSENEAGFSPWSPEVS 1213
                 .|..::|::::..:|:||..:|.|.||......|.|:::|:||:.:.|..|.|..|....
Zfish   523 GSPKEDDTGYVLEMEEQGSGYGFQASYDGEELSHTVRNLHRSTTYRFRVVAYNTEGKSNPSAVSE 587

  Fly  1214 YRTLAERPGRPGKPHAKGKIHGTQFKARWDAPSDSGGAEILCYHLELS--AAGPAFERIYSGAET 1276
            :.|..:||..|.:...|||.|.|.|:..||.|.||||:::..|.:|||  .:|.::.:.|||:..
Zfish   588 FTTAPDRPSCPCRLAVKGKPHPTSFRLTWDPPKDSGGSDVTKYVVELSEGLSGSSWSQAYSGSAL 652

  Fly  1277 EAMCERLQPGTTYALRACCEGPAGQSPYSDIGHVTTEAVPPSAPPPPHCSDPPSPYAALLKLRPP 1341
            |.:|:.|.||::|..|..|....|:||.::...|.|..|||....||.....|......|:..||
Zfish   653 ECVCDGLSPGSSYQARVHCISAGGESPLTEALQVQTPPVPPGPCQPPRVVGKPKAREVQLRWAPP 717

  Fly  1342 EYNGGAPILEFEAQMRRLEQVQPPQLVYRGKQTYFVAQDLTPGGMYETQVRAINRIGAGSWSQWM 1406
            ..:||:.:..:..:| ...||...:.||:|.:.......|.||..|..::||.|:.|.|.:|:..
Zfish   718 LVDGGSSVSLYNLEM-FAPQVDEAREVYQGSELDCTVPSLLPGRTYGFRIRAANKAGYGPFSERS 781

  Fly  1407 RFTAAAAAPGVPEELR---VLVKSATHLGVSWQPPLQENGAPVTSYTLKSASQERKEDDSEEEVK 1468
            ..|   ..||.||..|   :..||.|...|||:.|: .|||.|:.|.|:..:.|           
Zfish   782 EVT---TGPGAPEACRPPHITCKSPTCAVVSWEAPV-SNGAVVSEYRLEWGAAE----------- 831

  Fly  1469 EPPSSEFHNCYQGPQTCAELRNLSPYTRYHFRIQASNSAGTGNSSDVISVCTPAAVPGA------ 1527
                .....||.|...|.|:|.|.|...|..|:||.|:||.|..|:::...||.:||..      
Zfish   832 ----GSMQVCYSGAALCHEMRGLLPANNYFCRVQAVNAAGAGPFSELMFCQTPCSVPAMISSVHA 892

  Fly  1528 ---PQMQGYEFTAQE-----------------------VTLNWTQPAAHGSPICSYNIEYGERTI 1566
               .:|:..|.||:.                       :.|.|..|..|||.|.||.|:.||:..
Zfish   893 LRDSEMKIQERTAERGEEEEEDEEEDEESAMLYSPSTCLGLRWEAPCDHGSQITSYLIDLGEKQP 957

  Fly  1567 ATPDACTRYTVSGLMPETGYKFRVQAVNAIGAGAFSAYAKLTTQPAPPAPPRLECSGAGHNYIKL 1631
            ......|:|.:..|.|:|.|:.|:||:|::|.|.||...||.|:|.||.||||||:.:.|..::|
Zfish   958 ILTGPVTQYIIQNLQPDTTYRIRIQALNSLGTGPFSHTFKLKTKPLPPLPPRLECTASSHQTLRL 1022

  Fly  1632 KWGENGNGKVVNSNPSGNGGDFTKYFVEMYVARAKQFQAVYSGTNCMCKVHKLQERSSYTFRIYA 1696
            |||: |..|   :.|:    |..:|.::|.....: |.::|.|.....||.:|.|.:||.|||.|
Zfish  1023 KWGD-GPAK---AQPT----DSLQYHLQMEDKNGR-FISLYKGPCHTHKVQRLNESTSYAFRIQA 1078

  Fly  1697 HTDRAGDGDYSEEFVFETSATLPANIKPPRVVQEGSVCLMELPGQLGMQLTLEWQHSKNSFNDRV 1761
            ..: ||:|.:|..:.|.|..:.||.:|.|||.:....|            .:.|:.......|.:
Zfish  1079 FNE-AGEGPFSSVYTFTTPRSPPAPLKAPRVERVDESC------------EVSWETLPPMKGDPI 1130

  Fly  1762 EYELQYAVLGAAELEGESLSPKGRSSSSSGSSNGAPINLPNHDYRQLYRGPETKFTIDNLAAGTC 1826
            .|.||.       ::|                        |.|::|:|:|..:.|.:.||::...
Zfish  1131 IYCLQC-------MQG------------------------NSDFKQIYKGSSSSFQLPNLSSSMD 1164

  Fly  1827 YQFRVCPVRIAAGGELLYGQPSSPLRYQVPSELDPSSATCHHHLHGSTATPAMASSQRSSRKLS 1890
            |:||||.:|.......:.|..||.: ..:|:.:|....|      ||:.:.. |.:|:..|.|:
Zfish  1165 YRFRVCAIRQCQDAPEIIGSYSSTV-ILLPARVDGPGPT------GSSGSKT-AENQKPKRSLT 1220

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mtgoNP_001137829.1 FN3 <937..>1125 CDD:442628 75/197 (38%)
FN3 1037..1124 CDD:238020 36/86 (42%)
FN3 <1149..1216 CDD:238020 21/71 (30%)
FN3 1221..1312 CDD:238020 35/92 (38%)
FN3 1334..1409 CDD:238020 21/74 (28%)
FN3 <1380..>1609 CDD:442628 83/263 (32%)
FN3 1619..1714 CDD:238020 32/94 (34%)
fndc3aXP_073780331.1 None

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