Protein Alignment CG5953 and CG4004

DIOPT Version :9

• Sequence 1: NP_001260503.1
• Gene: CG5953 / 34985
• FlyBaseID: FBgn0032587
• Length: 701
• Species: Drosophila melanogaster
• Sequence 2: NP_727638.2
• Gene: CG4004 / 32226
• FlyBaseID: FBgn0030418
• Length: 359
• Species: Drosophila melanogaster
• Alignment Length: 611
• Identity: 111/611 - (18%)
• Similarity: 166/611 - (27%)
• Gaps: 288/611 - (47%)

  Fly    90 YRCHTELWNRADPKYKDKLCRFRAWSEIAE--RFGCSKAEV---ERKMNVLLTQYRREKHKMFVK 149
            ||...|||......|:|:..:..::|.:.|  |...|.|.:   :||:|...|.||||..|:
  Fly    18 YRSMPELWLVRSKLYRDRQLKLESYSRLLELLRTTDSYANIHTLKRKINNFRTSYRRELRKV--- 79

  Fly   150 IYQGIQPNPSKWYAFKRFDF---MEAGGGSLSGGGSVGSGVNAASGNLVPNPVSSSAAAAAHNGL 211
            :..|....|:.|| ||..||   :|.|...|       .|:.||..:||.|
  Fly    80 LDSGNTYKPTLWY-FKELDFLYELETGELQL-------EGIVAADRDLVRN-------------- 122

  Fly   212 NGLAAAAAAYESGTIAAAGNGGAPPTVPGGGAPGSQTVMQHRRIKTKELKYFGAMGLNIPMLIAS 276
                                               ..|:|:...||..   |||.       :|.
  Fly   123 -----------------------------------SKVLQNESNKTIT---FGAQ-------LAE 142

  Fly   277 SQTLDSWNTAGQYSPPISGSGGGGSERGGSAGGGGVPPQQLRVPLPMSYHGGAGGGSSSSDFQQS 341
            .:...|:                            :..:::.|           ..:.:.|.||
  Fly   143 QEVSMSF----------------------------IVKREIEV-----------DENITEDMQQ- 167

  Fly   342 PLKTMDTSDNEDNNNTKEDVAAAAALGQLAAKVELRSPAGAGPGGGGGSSSREANDPTSDPIKPD 406
             |:|.|.....|....:||:....|:|.                |.........|||..|
  Fly   168 -LETEDVDIMSDAFPHEEDMLRLDAVGD----------------GDVEPEPEPDNDPELD----- 210

  Fly   407 RTLSEAGSSPIPNTNMHEAHKNHLLNSPAGGRSVTPRQAHEQLHHHPHTQHHLQQQQQQLQQQHQ 471
                          ||.:...::..||.||  |:                            ::.
  Fly   211 --------------NMDDHVDDYRNNSSAG--SI----------------------------KNN 231

  Fly   472 QLQQQQLQQHQQQQQLHHGHEELDIKQELVDYFHGQAAGGGGGGGGGVVGPAPPPPPESHRSYSS 536
            ..||..:..|||    |:|..:...|                 .|..:         .:.|..||
  Fly   232 GYQQHTVSSHQQ----HNGESQTSDK-----------------SGRRI---------RNRRRRSS 266

  Fly   537 AGEESRLQLVDMAQDLRVAQAKANFGAFILPPRGSDASTPAMPLNMRKLTGAGSAGHMLMNSLLG 601
                :....|:.|:..|..:.
  Fly   267 ----NDTDYVEAARKRRNVET-------------------------------------------- 283

  Fly   602 SRESMSDGEEPDPDNDEATESAASPGHIKSSVSAQAAVAASAFYAESLNRDDCDFIGSNVSLKLR 666
            |........|.|.:.|...||.:.                   |       :|:.||..::...|
  Fly   284 SNRDRDWHRERDRERDRKHESDSE-------------------Y-------ECELIGKRMASHFR 322

  Fly   667 TMDRTQRIIAEKLISEVLYYGQFNEL 692
            .|...||:.||::|||||.||:.|.|
  Fly   323 RMRPDQRLFAERIISEVLVYGRMNRL 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG5953	NP_001260503.1	MADF_DNA_bdg	86..170	CDD:287510	29/87 (33%)
CG4004	NP_727638.2	MADF_DNA_bdg	14..99	CDD:402258	28/84 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	P	PTHR21505
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	2.010