DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpr2 and TPR13

DIOPT Version :9

Sequence 1:NP_001260501.1 Gene:Tpr2 / 34984 FlyBaseID:FBgn0032586 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_196571.1 Gene:TPR13 / 830873 AraportID:AT5G10090 Length:594 Species:Arabidopsis thaliana


Alignment Length:376 Identity:107/376 - (28%)
Similarity:176/376 - (46%) Gaps:43/376 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EEKKKLGNDQYKAQNYQNALKLYTDAISLCPDSAAYYGNRAACYMMLLNYNSALTDARHAIRIDP 114
            |..|.:||:.||..|:..||.||..|||:.|..|:|..|::|....|.....|:.:.|.||||||
plant   238 ETLKIMGNEDYKNGNFAEALALYEAAISIDPKKASYRSNKSAALTALGRILEAVFECREAIRIDP 302

  Fly   115 GFEKAYVRVAKCCLALGDI---------IGTEQAVKMVNELNSLSTAVAAEQTAAQKLRQLEATI 170
            .:.:|:.|:|...|.||::         .|.|...:.:::...:.|.: .:.|.|::||.....|
plant   303 HYHRAHHRLANLYLRLGEVENSIYHFKHAGPEADQEDISKAKMVQTHL-NKCTEAKRLRDWNTLI 366

  Fly   171 QANYDTKSYRNVVFYLDSALKL----APACLK-YRLLKAECLAFLGRCDEALDIAVSVMKLDTTS 230
            :...:|     :....|:|.::    |.|.|| ||..:|:  ..|.||      .|...::.|..
plant   367 KETENT-----ITTGADAAPQVYALQAEAFLKTYRHQEAD--DALSRC------PVFDGEMSTKY 418

  Fly   231 ADAIYVRGLCLYY------TDNLDKGILHFERALTLDPDHYKSKQMRSKCKQLKEMKENGNMLFK 289
            ..:|...|..:.:      :....:.:...:||..||.::.:...:..:.:.:...:..||..||
plant   419 YGSIGYAGFLVVWAQVHMASGRFVEAVEAIQRAGKLDGNNREVSMVLRRAQAVTAARSRGNDFFK 483

  Fly   290 SGRYREAHVIYTDALKIDEHNKDINSKLLYNRALVNTRIGNLREAVADCNRVLELNSQYLKALLL 354
            :||::||...|.:.|..|..    ||.||.|||...:::|....||.|.:..|.:...|.||.|.
plant   484 AGRFQEACTAYGEGLDHDSR----NSVLLCNRAACLSKMGQFDRAVEDTSAALAVRPGYTKARLR 544

  Fly   355 RARCYNDLEKFEESVADYETALQLEKTPEIKRMLR---EAKFALKKSKRKD 402
            ||.|...|..:|.:|.|||  :..::|||.:.:::   ||:..|.|.:..|
plant   545 RADCNAKLGNWESAVGDYE--ILRKETPEDEEVIKGLSEAQKQLVKRRGHD 593

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpr2NP_001260501.1 TPR_11 49..114 CDD:290150 26/63 (41%)
TPR repeat 49..77 CDD:276809 12/26 (46%)
TPR repeat 82..112 CDD:276809 9/29 (31%)
TPR_11 201..262 CDD:290150 11/66 (17%)
TPR repeat 201..225 CDD:276809 5/23 (22%)
TPR_1 231..264 CDD:278916 6/38 (16%)
TPR repeat 231..259 CDD:276809 4/33 (12%)
TPR_11 278..345 CDD:290150 23/66 (35%)
TPR repeat 310..344 CDD:276809 12/33 (36%)
TPR_11 314..380 CDD:290150 25/65 (38%)
TPR repeat 349..377 CDD:276809 12/27 (44%)
DnaJ 401..>503 CDD:223560 1/2 (50%)
DnaJ 402..469 CDD:278647 1/1 (100%)
TPR13NP_196571.1 TPR repeat 237..265 CDD:276809 12/26 (46%)
TPR_11 270..331 CDD:290150 19/60 (32%)
TPR repeat 270..300 CDD:276809 9/29 (31%)
TPR repeat 305..331 CDD:276809 6/25 (24%)
TPR_11 473..536 CDD:290150 23/66 (35%)
TPR repeat 473..499 CDD:276809 9/25 (36%)
TPR repeat 504..534 CDD:276809 12/29 (41%)
TPR_1 508..538 CDD:278916 9/29 (31%)
TPR_16 517..573 CDD:290168 21/57 (37%)
TPR repeat 539..563 CDD:276809 10/23 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D506649at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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