DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Tpr2 and TTL2

DIOPT Version :9

Sequence 1:NP_001260501.1 Gene:Tpr2 / 34984 FlyBaseID:FBgn0032586 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_001319556.1 Gene:TTL2 / 820724 AraportID:AT3G14950 Length:730 Species:Arabidopsis thaliana


Alignment Length:499 Identity:131/499 - (26%)
Similarity:208/499 - (41%) Gaps:99/499 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QPTIDVKAEQIVP----------KDAAT---IA------EEKKKLGNDQYKAQNYQNALKLYTDA 75
            :||:...:..::|          .||.|   ||      ||.|:.||:.::...:..|||||..|
plant   220 KPTMMSDSSSVLPLTLSNNSTGGPDAYTSWKIAIYGSNPEEVKRFGNEMFRKGCFAEALKLYDRA 284

  Fly    76 ISLCPDSAAYYGNRAACYMMLLNYNSALTDARHAIRIDPGFEKAYVRVAKCCLALG-------DI 133
            |.|.|.:|.|:.||||....|.....|:.:...||::||.|.:|:.|:|...|.||       .:
plant   285 IELSPSNATYHSNRAAALSSLGQIGEAVNECEIAIKLDPNFARAHHRLASLLLRLGYVDNAGIHL 349

  Fly   134 IGTEQ-----AVKMVNELNS-LSTAVAAEQTAAQK--LRQLEATIQANYDTKSYRNVVFYLDSAL 190
            ...|:     .|||:.:::. |:....|.:.....  |.::.|.|.:.            .||:.
plant   350 YSVEEPLDPTVVKMLQQVDKHLNKCTYARRRGEWSIVLTEVSAAIASG------------ADSSP 402

  Fly   191 KLAPACLKYRLLKAECLAFLGRCDEALDIAVSVMKLDTTSADAIYVRGLCLY---YTD------- 245
            :||       :.|||.|..|.|.|:|..:...|.|::...|...:.|...:.   ||.       
plant   403 QLA-------MCKAEALLKLLRLDDAQRVLECVPKVEPFPASFSHTRFFDMIAEAYTSFVKSQME 460

  Fly   246 ----NLDKGILHFERALTLDPDHYKSKQMRSKCKQLKEMKENGNMLFKSGRYREAHVIYTDALKI 306
                ..:..::..|:|..:||.:.:.:.:....:.:...::.||.|::..||.||...|.:.||.
plant   461 LALGRFENAVVTAEKASKIDPQNNEVEILYKNVRLITRARDRGNDLYELERYTEARSAYAEGLKY 525

  Fly   307 DEHNKDINSKLLYNRALVNTRIGNLREAVADCNRVLELNSQYLKALLLRARCYNDLEKFEESVAD 371
            |..    |:.||..||....::|....::.|||..|.:...|.|..|.||..|..||::.|:|:|
plant   526 DPS----NATLLCYRADCFFKVGMWESSIEDCNHALLILPSYTKPRLQRAALYTKLERWAEAVSD 586

  Fly   372 YE-TALQLEKTPEIKRMLREAKFALKKSKRKDYYKILGIGRNASDDEIKKAYRKKALVHHPD--- 432
            || ...:|....||...|..|:.|||||:.:   .:|.:......:||......||.:..|.   
plant   587 YEILRKELPYDKEIAESLFHAQVALKKSRGE---VVLNMEFGGEVEEISSLEELKAALTRPGVSV 648

  Fly   433 ----RHANSSAEE-----------------RKEEELKFKEVGEA 455
                |.::...:|                 .|.|.:|..|||.|
plant   649 VHFFRASDPQCKEISTFVDALCVRYPSLHFLKVEIVKCPEVGNA 692

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpr2NP_001260501.1 TPR_11 49..114 CDD:290150 25/70 (36%)
TPR repeat 49..77 CDD:276809 12/33 (36%)
TPR repeat 82..112 CDD:276809 10/29 (34%)
TPR_11 201..262 CDD:290150 16/74 (22%)
TPR repeat 201..225 CDD:276809 9/23 (39%)
TPR_1 231..264 CDD:278916 8/46 (17%)
TPR repeat 231..259 CDD:276809 6/41 (15%)
TPR_11 278..345 CDD:290150 21/66 (32%)
TPR repeat 310..344 CDD:276809 10/33 (30%)
TPR_11 314..380 CDD:290150 24/66 (36%)
TPR repeat 349..377 CDD:276809 12/28 (43%)
DnaJ 401..>503 CDD:223560 15/79 (19%)
DnaJ 402..469 CDD:278647 15/78 (19%)
TTL2NP_001319556.1 TadD 189..>338 CDD:227343 38/117 (32%)
TPR repeat 258..286 CDD:276809 11/27 (41%)
PEP_TPR_lipo 274..>622 CDD:274350 104/373 (28%)
TPR repeat 291..321 CDD:276809 10/29 (34%)
TPR repeat 402..430 CDD:276809 11/34 (32%)
TPR repeat 529..559 CDD:276809 10/29 (34%)
TPR repeat 564..588 CDD:276809 10/23 (43%)
TRX_family 635..725 CDD:239245 12/58 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D506649at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.