DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpr2 and TTL3

DIOPT Version :9

Sequence 1:NP_001260501.1 Gene:Tpr2 / 34984 FlyBaseID:FBgn0032586 Length:508 Species:Drosophila melanogaster
Sequence 2:NP_565976.1 Gene:TTL3 / 818858 AraportID:AT2G42580 Length:691 Species:Arabidopsis thaliana


Alignment Length:477 Identity:135/477 - (28%)
Similarity:216/477 - (45%) Gaps:74/477 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 EEKKKLGNDQYKAQNYQNALKLYTDAISLCPDSAAYYGNRAACYMMLLNYNSALTDARHAIRIDP 114
            ||.|::|||.|:..::..||.||..||.:.|.:|||..||||....|.....|:.:...|:||||
plant   221 EELKRMGNDMYRRGSFSEALSLYDRAILISPGNAAYRSNRAAALTALRRLGEAVKECLEAVRIDP 285

  Fly   115 GFEKAYVRVAKCCLALGDIIGTEQAVKMVNELNSLSTAVAAEQTAAQKLRQLEATIQANYDTK-- 177
            .:.:|:.|:|...|.||:   .|.|.:.:     ..:....:|...|:|:.||..::..::.:  
plant   286 SYSRAHQRLASLYLRLGE---AENARRHI-----CFSGQCPDQADLQRLQTLEKHLRRCWEARKI 342

  Fly   178 -SYRNVVFYLDSAL----KLAP---ACLKYRLLKAECLAFLGRCDEALDIAVS-VMKLD--TTSA 231
             .::..:...|:|:    ..:|   ||      |||....|.:.::: |..|| :.:||  ..|.
plant   343 GDWKTAIKETDAAIANGADSSPQLVAC------KAEAFLRLKQIEDS-DFCVSCIPRLDHHYHSQ 400

  Fly   232 DAIYVRG-------LCLYYTDNL-----DKGILHFERALTLDPDHYKSKQMRSKCKQLKEMKENG 284
            ..:.:.|       ||:....::     :..::..|||..||..:.:...:.:..|.:...:..|
plant   401 PQVKLFGMVVEAYVLCIQAQVDMALGRFENAVVKAERAAMLDQTNPEVVSVLNNVKMVVRARTRG 465

  Fly   285 NMLFKSGRYREAHVIYTDALKIDEHNKDINSKLLYNRALVNTRIGNLREAVADCNRVLELNSQYL 349
            |.||.|||:.||.|.|.|.||.|    |.||.|..|||....::|...::|.|||..|:....|:
plant   466 NELFSSGRFSEACVAYGDGLKQD----DSNSVLYCNRAACWYKLGLWEKSVEDCNHALKSQPSYI 526

  Fly   350 KALLLRARCYNDLEKFEESVADYE-TALQLEKTPEIKRMLREAKFALKKSKRKDYYKILGIGRN- 412
            ||||.||..|..|.::|::|.||| ...:|....|:...|..||..|  ..|....|.||.... 
plant   527 KALLRRAASYGKLGRWEDAVKDYEFLRRELPGDSEVAESLERAKTVL--MNRSQESKSLGFNNEV 589

  Fly   413 ---ASDDEIKKAYRKKALVHHPDRHANSSAEERKEEELKF---------------KEVGEAYAIL 459
               ::.|:.||:.   ||......|..||:..:.||...|               .:|.|:.|:.
plant   590 EAVSTLDKFKKSV---ALPGVSVFHFKSSSNRQCEEISPFINTLCLRYPLVHFFMVDVEESMALA 651

  Fly   460 -SDAHKK----SRYDSGQDIEE 476
             :::.:|    ..|.:|..::|
plant   652 KAESIRKVPTFKMYKNGDKVKE 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpr2NP_001260501.1 TPR_11 49..114 CDD:290150 26/63 (41%)
TPR repeat 49..77 CDD:276809 12/26 (46%)
TPR repeat 82..112 CDD:276809 10/29 (34%)
TPR_11 201..262 CDD:290150 17/75 (23%)
TPR repeat 201..225 CDD:276809 7/24 (29%)
TPR_1 231..264 CDD:278916 8/44 (18%)
TPR repeat 231..259 CDD:276809 6/39 (15%)
TPR_11 278..345 CDD:290150 28/66 (42%)
TPR repeat 310..344 CDD:276809 13/33 (39%)
TPR_11 314..380 CDD:290150 27/66 (41%)
TPR repeat 349..377 CDD:276809 13/28 (46%)
DnaJ 401..>503 CDD:223560 21/100 (21%)
DnaJ 402..469 CDD:278647 18/90 (20%)
TTL3NP_565976.1 TPR repeat 220..248 CDD:276809 12/26 (46%)
PEP_TPR_lipo <233..>597 CDD:274350 110/384 (29%)
TPR repeat 253..283 CDD:276809 10/29 (34%)
TPR repeat 412..440 CDD:276809 5/27 (19%)
3a0801s09 <456..>581 CDD:273380 50/130 (38%)
TPR repeat 491..521 CDD:276809 12/29 (41%)
TPR repeat 526..550 CDD:276809 11/23 (48%)
TRX_family 598..687 CDD:239245 17/79 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D506649at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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