DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tpr2 and Dnajc18

DIOPT Version :9

Sequence 1:NP_001260501.1 Gene:Tpr2 / 34984 FlyBaseID:FBgn0032586 Length:508 Species:Drosophila melanogaster
Sequence 2:XP_006254608.1 Gene:Dnajc18 / 291677 RGDID:1310237 Length:357 Species:Rattus norvegicus


Alignment Length:167 Identity:51/167 - (30%)
Similarity:74/167 - (44%) Gaps:49/167 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   358 CYNDLEKFEESVADYE-------------TALQLEKTPEIKRMLREAKFALKKSKRKDYYKILGI 409
            |.|.::..:|..::.|             |..||.....||             |.::||.|||:
  Rat    38 CCNCMKAQKEKKSENEWSQTRQGDGNATYTEEQLRGVQRIK-------------KCRNYYDILGV 89

  Fly   410 GRNASDDEIKKAYRKKALVHHPDRHANSSAEERKEEELKFKEVGEAYAILSDAHKKSRYDSGQDI 474
            ..||||:|:||||:|.||..|||::....|.:      .||.:|.|:|:||:..|:.|||...|.
  Rat    90 SHNASDEELKKAYKKLALKFHPDKNCAPGATD------AFKAIGNAFAVLSNPDKRLRYDEYGDE 148

  Fly   475 E--------------EQEQADFDPNQMFRTFFQFNGG 497
            :              ...:||..|.::|..||   ||
  Rat   149 QVTLTAPRARPYHYYRDVEADISPEELFNVFF---GG 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tpr2NP_001260501.1 TPR_11 49..114 CDD:290150
TPR repeat 49..77 CDD:276809
TPR repeat 82..112 CDD:276809
TPR_11 201..262 CDD:290150
TPR repeat 201..225 CDD:276809
TPR_1 231..264 CDD:278916
TPR repeat 231..259 CDD:276809
TPR_11 278..345 CDD:290150
TPR repeat 310..344 CDD:276809
TPR_11 314..380 CDD:290150 7/34 (21%)
TPR repeat 349..377 CDD:276809 5/31 (16%)
DnaJ 401..>503 CDD:223560 41/111 (37%)
DnaJ 402..469 CDD:278647 30/66 (45%)
Dnajc18XP_006254608.1 DnaJ 82..143 CDD:278647 30/66 (45%)
DUF1977 250..349 CDD:286411
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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