DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl8 and frma

DIOPT Version :10

Sequence 1:NP_609795.2 Gene:Nepl8 / 34983 FlyBaseID:FBgn0032585 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_572226.2 Gene:frma / 31464 FlyBaseID:FBgn0029769 Length:611 Species:Drosophila melanogaster


Alignment Length:670 Identity:156/670 - (23%)
Similarity:268/670 - (40%) Gaps:139/670 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LLNGIL-----SHVDKEANPCENYYNHACGQYNMRHIDDTFFDIIQMLDHQVNQNLVKLMDELEM 79
            |:.|:|     ||  .:|:||:|:|..|||.::..|..|::...:..||:...:.|..|:|. |.
  Fly    10 LIVGLLVVQVKSH--PQADPCQNFYKVACGNWSASHATDSYESFMDRLDYNYQEKLADLLDN-ER 71

  Fly    80 SSQLPDFNVSSVDGKVLRYYLSCRGAPRNMDSLSQYLKVISPGEGLTWPQFIPDGSSWPQENFKW 144
            ....|.|.     .::..:|.:|| .|.:.|.:.:.|:.:...|.:...:.              
  Fly    72 EDDEPHFL-----QQLRNFYTACR-KPLSQDQVLRILEHLIVMENIQNEEL-------------- 116

  Fly   145 LKALAHLHRYGLTNVFFNLEVVSNPRNASEYMV---------ELNTPTFGEESQLPNSFIEILSV 200
                    ..||| ..|.|:|:.:..:::.|.:         ..:..|...|......|.::.:.
  Fly   117 --------SVGLT-AAFRLQVLIDLNDSNTYDIWKQLMSHRKHWDPNTTNREPLTREMFDKLWAS 172

  Fly   201 LYIIKVPSSEIITLARKMRTLELLLKTMINPIDTLNNRYISIR--DFQMETGHNWQRFFEILIGS 263
            |..|..|..|...  |::..||..:.:..:..|..::..:..|  .|.|....|....:|.|  |
  Fly   173 LPKIPFPFKEYYW--RELSELEEKIMSYGSEDDGFDSGDLVTRIPPFWMMPWPNGNITYENL--S 233

  Fly   264 SAAPELQVLVRNFRYFTALKELMDKQDARLVASYIMTRFAIFLLDETMGGRESTE--------CV 320
            ..|..|.:....|                 :.:||..|  :.|:.|.:    |||        |.
  Fly   234 QMAHWLDIKANEF-----------------ILTYIYMR--LKLVAEGV----STESWHIDRDQCA 275

  Fly   321 SQVRRNMNLAANMLYKE---RFFEDSTFSANILEIKDIFEKLRHQFLLQVDQNHLELTALQMKFF 382
            .|.|:.::..|..|.::   |..|:..       ::|||.:|:.:|..::..|....|.....|.
  Fly   276 EQSRQILSHPAAWLVEKNHPRLKEEPV-------LQDIFAELKQRFGQKLLANRNNFTRSTQHFL 333

  Fly   383 VRKAEAIEINVVNLPKTDDLRHF---IGQYYQDLQFPTGE--------LDYHQEHLKVLQ----- 431
            :.|.:.:.:.:..||:....:..   |.::|:|:.....:        |::.:.|.|..|     
  Fly   334 LGKLKRMRLRLSILPRNSSAQSMVRRIERHYRDVHMNASDYFGNLHIGLNHSRSHKKYAQLWAIV 398

  Fly   432 FRTQKMLAQSSKGHSEEQNILTYRSQAAP---------------LPPPQPFFQLESEDVFKYSLM 481
            |..|.:.::.||.......:..|.:.|:.               |.|  ||:......:..||.:
  Fly   399 FGRQLIPSRISKSDLYPTQVRGYGTYASAFYIVKQNMLIVPLSLLEP--PFYTHGQPSILTYSAL 461

  Fly   482 GYIMAHHLISAFATEGIT-----IGSDGNDQSF-RSHRFEEAVSCLSRN-SENIDESMGDIAGLE 539
            |:|:.|.|...|.:||:|     :||...|:.. |:.||::.:.||.|. .....|...|.:|||
  Fly   462 GFILGHELSHGFDSEGMTFSSHGVGSSAVDRELDRNPRFQQELGCLRRRFGRKRYEKFADASGLE 526

  Fly   540 LAYFTY---AKMAKNRNRLDFTHLPPEQIFFLNVGQFFCGNSDMLV--QYKEDQVRLQRAIEGFE 599
            |||..|   |:....|||.....:..:|.||.|..||||.:.::|.  .:..|:.|:..|:..||
  Fly   527 LAYSAYFDTAQTDHKRNRSAEELVTQKQQFFHNFAQFFCSDKELLQAHDHGSDRKRVNDAVAHFE 591

  Fly   600 PFDKAFGCYRNKPKHEKCRL 619
            ||.:||.| ...|:..:|||
  Fly   592 PFREAFSC-GPSPRRRQCRL 610

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl8NP_609795.2 GluZincin 32..618 CDD:472708 148/650 (23%)
frmaNP_572226.2 GluZincin 25..601 CDD:472708 147/642 (23%)

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