DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl8 and nep-24

DIOPT Version :9

Sequence 1:NP_609795.2 Gene:Nepl8 / 34983 FlyBaseID:FBgn0032585 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_503005.3 Gene:nep-24 / 190993 WormBaseID:WBGene00013786 Length:567 Species:Caenorhabditis elegans


Alignment Length:609 Identity:118/609 - (19%)
Similarity:211/609 - (34%) Gaps:133/609 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 WIICLLL---VPLV--AASSNTR----------LLNGILSHVDKEANPCENYYNHACGQYNMRHI 51
            :::.|||   .||.  |.:..||          |.:.:.::.|...:||:|::..|||:   .|.
 Worm    13 FMLLLLLTCTAPLAIGATTPATRNVCNTPACITLAHMLHNYHDPSVDPCDNFHQFACGR---EHE 74

  Fly    52 DDTFFDIIQMLDHQVNQNLVKLMDELEMSSQLPDFNVSSVDGKVLRYYLSCRGAPRN-------- 108
            .:| .||.......:|..:.:.:.:.|.|.       |..:..:...|.:|:...:|        
 Worm    75 HET-EDIYTKKTKTINNIMKRFLKKNETSR-------SKSENAMRTLYKACKTLEKNSTASRNKA 131

  Fly   109 MDSLSQYLKVISPGEGLTWPQFIPDGSSWPQENFKWLKALAHLHRYGLTNV-FFNLEVVSNPRNA 172
            :..:.|.::.|.     .||  :.| ..|.:..|.....|.:|.|.|..|. .|.:....|.||.
 Worm   132 LQDIFQDIQSIG-----AWP--VVD-DKWDESKFDLNDFLVNLVRLGRKNFGLFQMARYVNVRNF 188

  Fly   173 SEYMVELNTPTFGEES------QLPNSFIEILSVLYIIKVPSSEIITLARKMRTLELLLKTMINP 231
            :          .|.|:      .|..:..|||.. ..::..:.:::....:...||..|..  :.
 Worm   189 A----------IGPEAAWRHNVDLGKTISEILKA-NSVQTNNKKLLDDLAEYVNLEKALSQ--HK 240

  Fly   232 IDTLNNRYISIRDFQMETGHNWQRFFEILIGSSAAPELQVL---VRNFRYFT----------ALK 283
            .:|:...||........:..|:.|    |:....:|:.:.|   |....|.|          .|:
 Worm   241 FNTVQPGYIFSERSDFVSSVNFSR----LVLEMMSPDKRTLFPEVYQIMYLTNTSLFFGKNNNLE 301

  Fly   284 ELMDKQDARLVASYIMTRFAIFLLDETMGGRESTECVSQVRRNMNLAANMLYKERFFEDSTFSAN 348
            .::.....|.:|:|::.:|....:.:...|..|..|..:|...:..||...:...|...      
 Worm   302 TIIRNTSKRALANYLIFKFIDTSIADLTYGSPSAFCEQKVINFLPRAALRAFYRNFISK------ 360

  Fly   349 ILEIKDIFEKLRHQFLLQVDQNHLELTALQMKFFVRKAE--AIEINVVNLPKTDDLRHFIGQYYQ 411
              |.:....||            .|.|.:|:...:...:  :|:...:.:.:...:...||  |.
 Worm   361 --ENRKKITKL------------TEATQVQLLKIIGATDWMSIKSKKIAMDRVSSMNMVIG--YP 409

  Fly   412 DLQFPTGELDYHQEHLKVLQFRTQKMLAQSSKGHSEEQNILTYRSQAA--PLPP----------- 463
            |...|.|:||...|||.:....|...:.:.......||.:..|..:..  ||.|           
 Worm   410 DYFDPPGKLDGLFEHLNLSSSDTYYTVVRKINRFMREQEMDYYTGEVPYYPLFPGLMTNAMYNAN 474

  Fly   464 -----------PQPFFQLESEDVFKYSLMGYIMAHHLISAFATEGITIGSDGNDQSF----RSHR 513
                       ..|||.....|....:.....:||.:...|:...:.| ..|..:.:    .:..
 Worm   475 DNNLMIFAPFFDDPFFDSSFPDYANIAFTSNTLAHEMGHTFSPHLMDI-MTGTTEVWLTPKETEE 538

  Fly   514 FEEAVSCL-SRNSENIDESMGDIA 536
            :|:.|.|| .:.:|..|...|.||
 Worm   539 YEKRVKCLEDQYTEYDDPEYGRIA 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl8NP_609795.2 GluZincin 32..618 CDD:301352 108/564 (19%)
nep-24NP_503005.3 GluZincin 58..561 CDD:301352 106/561 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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