DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl8 and nep-4

DIOPT Version :9

Sequence 1:NP_609795.2 Gene:Nepl8 / 34983 FlyBaseID:FBgn0032585 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_509156.2 Gene:nep-4 / 183746 WormBaseID:WBGene00016896 Length:437 Species:Caenorhabditis elegans


Alignment Length:640 Identity:105/640 - (16%)
Similarity:183/640 - (28%) Gaps:262/640 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MWIICLL-LVPLVAASSN--TRLLNGILSHVDKEANPCENYYNHACGQYNMRHIDDTFFDIIQML 62
            ||:|.|. .:|...|..:  ..:.|.:...||.:::||:::|.|||...::.       |||:: 
 Worm     1 MWLIILFCFLPTQNAYEHPFDFIENALEKIVDWKSDPCDDFYRHACPVGSIE-------DIIKV- 57

  Fly    63 DHQVNQNLVKLMDELEMS-SQLPDFNVSSVDGKVL-----RYYLSCRGAPRNM----DSLSQYLK 117
                  ::..|.|.|..| .|....|    :|||.     |.::.|....:.:    |...:::.
 Worm    58 ------SMQPLKDALNHSWKQKGQRN----EGKVYNINFRRSHICCHFFCKLLFIYYDYQYRFIN 112

  Fly   118 VISPGEGLTWPQFIPDGSSWPQENFKWLKALAHLHRYGLTNVFFNLEVVSNPRNASEYMVELN-T 181
            .::..:|:..|.:                                            |.||.| |
 Worm   113 YVTFYDGMLQPLY--------------------------------------------YHVEANVT 133

  Fly   182 PTFGEESQLPNSFIEILSVLYIIKVPSSEIITLARKMRTLELLLKTMINPIDTLNNRYISIRDFQ 246
            ....|..|:....:| |..:::.|.|                                       
 Worm   134 DGINEIHQMMEDMVE-LGNIWLEKTP--------------------------------------- 158

  Fly   247 METGHNWQRFFEILIGSSAAPELQVLVRNFRYFTALKELMDKQDARLVASYIMTRFAIFLLD--E 309
                  |      :|.::...|::.:....:...:|.:              .|.|...||.  |
 Worm   159 ------W------VINNNLTEEMKNITNAIKMPVSLTK--------------YTNFIYNLLSPIE 197

  Fly   310 TMGGRESTECVSQVRRNMNLAANMLYKERFFEDSTFSANILEIKDIFEKLRHQFLLQVDQNHLEL 374
            |    :...|||:                 ||.                        :..|.|..
 Worm   198 T----DFLNCVSE-----------------FEG------------------------IQNNTLFC 217

  Fly   375 TALQMKFFVRKAEAIEINVVNLPKTDDLRHFIGQYYQD-----------LQFPTGELDYHQEHLK 428
            .....|.|||..                    |.|:.|           ..||    :|:  |..
 Worm   218 LFYSAKIFVRTR--------------------GSYFIDDNGYNAEGTIYFGFP----NYY--HTT 256

  Fly   429 VLQFRTQKMLAQSSK-GHSEEQNILTYRSQAAPLPPPQPFFQLESEDVFKYSLMGYIMAHHLISA 492
            ...:|..|:....:: ||......:.:...    |...|:|...:||..:...:.....::    
 Worm   257 YGNWRASKLGYTGTRVGHEIGHTFIEHSIN----PDGLPYFSKPAEDCVQNQYLKTCNEYY---- 313

  Fly   493 FATEGITIGSDGNDQSFRSHRFEEAVSCLSRNSENIDESMGDIAGLELAYFTYAKMAKN--RNRL 555
               ||                  |.....:.:....|::..|:.||:|||....:...:  |.:.
 Worm   314 ---EG------------------EVPDACNTSDYTFDDNGADVFGLQLAYAILERDLSDQLREQA 357

  Fly   556 DFTHLPPEQIFFLNVGQFFCGNSDMLV---QYKEDQVRLQRAIEGFEPFDKAFGC 607
            |...:..||:.|.:....||..|....   .:....||: .|:.....|.:||.|
 Worm   358 DGLKITNEQLLFYSFAYRFCRGSKSNTTDGSHSHHNVRI-NAVAQMPGFQQAFNC 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl8NP_609795.2 GluZincin 32..618 CDD:301352 96/606 (16%)
nep-4NP_509156.2 GluZincin 250..425 CDD:387391 37/198 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.000

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