DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nepl8 and nep-3

DIOPT Version :9

Sequence 1:NP_609795.2 Gene:Nepl8 / 34983 FlyBaseID:FBgn0032585 Length:619 Species:Drosophila melanogaster
Sequence 2:NP_494679.2 Gene:nep-3 / 173730 WormBaseID:WBGene00016778 Length:634 Species:Caenorhabditis elegans


Alignment Length:693 Identity:133/693 - (19%)
Similarity:248/693 - (35%) Gaps:229/693 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PLVAASSNTRLLNGILSHVDKEANPCENYYNHACGQYNMRHIDDTFFDIIQMLDHQV-------- 66
            |:........|::.:|:..|...:||||:|..|||:||               :|.|        
 Worm    60 PMCLTPECITLVHQLLNFQDPSVDPCENFYQAACGKYN---------------EHNVIDGSRTAQ 109

  Fly    67 NQNLVKLMDELEMSSQLPDF------NVSSVDGKVLRYYLSCRGAPR-----NMDSLSQ-YLKVI 119
            .|.:||.:        :.||      :.|..:..:...|..|:.|..     |.:.|.: ::.:.
 Worm   110 KQQIVKRL--------IRDFLHKNQSSTSKSENSMKLLYEKCKEAKTIKVLGNQNLLQEIFMNIQ 166

  Fly   120 SPGEGLTWPQFIPDGSSWPQENFKWLKALAHLHRYGLTNV-FFNLEVVSNPRNASEYMVEL---- 179
            ..|   :||..   ..:|..:.|...:.|..|.|.|::|. ||.:.:      :|:..||:    
 Worm   167 KIG---SWPVL---DENWDGKKFNLNEMLLSLIRLGVSNFGFFEIII------SSDAFVEIKPAR 219

  Fly   180 NTPTFGEESQLPNSFIEILSVLYI----------IKVPSSEIITLARKMRTLELLLKTMINPIDT 234
            |.||       ..:..:|:|.:::          |:....|...|.|::::||.|::|  .|..:
 Worm   220 NFPT-------RENLSDIISKVFLGNGFQPNITAIENDLREYENLQRELKSLERLIQT--TPNRS 275

  Fly   235 LNNRYI--SIRDFQMETGHNWQRFFE-----ILIGSSAAPELQVLVRNFRYFTALKELMDKQDAR 292
            |.|..|  .::...:|    ::|..|     ::|........:|.|:||         :||::.:
 Worm   276 LVNYLIFNYLKSVMLE----YKRLPEEQCEGVVIDFLPRASTRVFVQNF---------LDKENRK 327

  Fly   293 LVASYIMTRFAIFLLDETMGGRESTECVSQVRRNMNLAANMLYKERFFEDSTFSANILEIKDIFE 357
            .||..|.        |..||                 ..:|:.:..:..:.:....:.::|:|  
 Worm   328 YVAGMIE--------DVKMG-----------------FIDMIQESTWLNEESKKVAVQKVKNI-- 365

  Fly   358 KLRHQFLLQVDQNHLELTALQMKFFVRKAEAIEINVVNLPKTDDLRHFIGQYYQDLQFPTGELDY 422
                                                         :..||  |.|...|.|.||.
 Worm   366 ---------------------------------------------KSMIG--YPDFFEPPGTLDR 383

  Fly   423 HQEHLKVLQFRTQKMLAQSSKGHSEEQNILTYRSQAAPLPPPQP------FFQ----------LE 471
            ..:.|.:.|..:...:.:..:..:.|| .:.:.:...||.|.||      |:|          :.
 Worm   384 SFKDLNIEQTDSYHTIVRKIQKFTNEQ-CMEFVASEIPLDPRQPILHANAFYQNTNFLAILAPVL 447

  Fly   472 SEDVF-----KY---SLMGYIMAHHLISAFATEGITIGSDGNDQSF----RSHRFEEAVSCLSR- 523
            .:.:|     :|   :::|.::||.:..||...||.....|..:.:    .|..:.:.:.||.| 
 Worm   448 DDPIFDTTFPRYVNLAVIGNVLAHEIGHAFDHTGINYDDAGQQRIWLTPEDSEEYGKRLRCLLRQ 512

  Fly   524 --------------NSENIDESMGDIAGLELAYFTYAKM-AKNRNRL-DFTHLPPEQIFFLNVGQ 572
                          .|:.:.|...|..|:|.|:.|:.|: ..|.:.: .|.:...:|::|.....
 Worm   513 HDEYDDPDFGRNLNGSKTLHEISADRFGVEAAWRTFKKLDLSNESEIVGFQNFNIDQLYFRTAAL 577

  Fly   573 FFCGNSDMLVQYKEDQVRLQRAIEGFEPFD--KAFGCYRNKPK 613
            .:|        .:.|...||.|::...|.:  :..|.|.|.|:
 Worm   578 IWC--------RQRDTTDLQYALQREHPTNNFRVNGIYANMPQ 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nepl8NP_609795.2 GluZincin 32..618 CDD:301352 129/671 (19%)
nep-3NP_494679.2 M13 82..631 CDD:189000 129/671 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3590
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11733
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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