DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and Chi3l1

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001296749.1 Gene:Chi3l1 / 89824 RGDID:620874 Length:391 Species:Rattus norvegicus


Alignment Length:451 Identity:126/451 - (27%)
Similarity:193/451 - (42%) Gaps:90/451 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLALS-LAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADN 70
            :.:||: .|||...:..:|..|||:|.:....|:|  ..|.....|....|||::|.:|.::   
  Rat    11 MRVALTGFAVLMLLQSCSAYKLVCYYTNWSQYREG--NGSCFPDALDHSLCTHIIYSFANIS--- 70

  Fly    71 YEMQSINKRLDLEQRH----LAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRR 131
                  |.:|...:.:    ...:.::|.|.|.:|.||||||.:   .|::....:.|..:..:.
  Rat    71 ------NNKLSTSEWNDVTLYGMLNTLKTRNPRLKTLLSVGGWS---FGSERFSRIVSNAKSRKT 126

  Fly   132 FIESARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTA 196
            |::|....:|.|.|||||||...|..|                               .|...|.
  Rat   127 FVQSVAPFLRTYGFDGLDLAWLYPGPK-------------------------------DKQHFTT 160

  Fly   197 LIKDLSAALKQ------NDLLLSLTV-LPNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEE 254
            |||:|.|...:      ..||||..| ...|.....||...||..||||||.|:||....|:  .
  Rat   161 LIKELKAEFTKEVQPGTEKLLLSAAVSAGKVTLDSGYDVAQIAQHLDFINLMTYDFHGTWRH--T 223

  Fly   255 ADFSAPTYEAVGQNRLG---HYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPV 316
            ....:|.:.  ||...|   ..|:::.:.:.|....|.||:.:||.|:|:|:.::......|.|:
  Rat   224 TGHHSPLFR--GQQDTGPDRFSNVDYGVGYMLRLGAPTNKLVMGIPTFGKSFTLASSENQVGAPI 286

  Fly   317 VPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYAFRAADEN 381
            .    |....|..:|::|.|.:.|||..:        ||  |.|.|::.....:.:        .
  Rat   287 T----GSGLPGRYTKEKGTLAYYEICDFL--------RG--AEVHRILGQQVPFAT--------K 329

  Fly   382 GDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-C-TNDRFPMLRAIKYRL 440
            |:.  |:.||||:|..:|..|.:.:.|.|..::.:..|||||. | .|..||:..|||..|
  Rat   330 GNQ--WVGYDDPESVKNKVKYLKNKQLAGAMVWAVDLDDFRGSFCGHNVHFPLTNAIKEAL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 119/429 (28%)
Glyco_18 27..419 CDD:214753 107/405 (26%)
Chi3l1NP_001296749.1 Glyco_18 31..365 CDD:214753 107/406 (26%)
GH18_chitolectin_chitotriosidase 32..388 CDD:119351 119/428 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350384
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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