DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and chit1

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001005792.1 Gene:chit1 / 448265 XenbaseID:XB-GENE-5801457 Length:492 Species:Xenopus tropicalis


Alignment Length:457 Identity:108/457 - (23%)
Similarity:200/457 - (43%) Gaps:103/457 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 LWLSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNAD 69
            ||..|.|    |..|....|..|||::.:....|...|::...:|:..|  ||||:|.:|.:|::
 Frog     6 LWAGLFL----LLHFHHGFAYKLVCYFTNWSQYRPEPAKYMPGNIDPKL--CTHLIYAFATMNSN 64

  Fly    70 N---YEMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRR 131
            .   ||...     |:..:   |..::|::.|::..||::||  ..:...::.:::.|.  |:|:
 Frog    65 KIAPYEWND-----DVLYK---QYNALKQQNPNLVTLLAIGG--WNFGTQKFTEMVSSA--GNRK 117

  Fly   132 -FIESARDLVRRYNFDGLDLALQLPRNK---PRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKG 192
             ||:|..:.:|.|.|:|:||..:.|.::   |...|                .|.:.|:      
 Frog   118 IFIDSVIEYLRLYGFNGIDLDFEYPGSRGSPPEDKH----------------RFTILTQ------ 160

  Fly   193 QVTALIKDLSAALKQNDLLLSLTVLP---NVNSSWYYDAPSIAPSLDFINLGTFDF------LTP 248
            ::....:|.:||..|:.||::..|..   .:::.  |:...|..:||||::.|:||      ::.
 Frog   161 EMLKAFEDEAAATNQSRLLMTAAVSAGKGTIDAG--YEIAEIGKTLDFISVMTYDFHGGWDPVSG 223

  Fly   249 QRNP------EEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSK 307
            ..:|      :..||.             ::|:.:.|.:|....|||.|:.||..||||:::...
 Frog   224 HNSPLCKGSKDTGDFQ-------------YFNIRYAMNYWKDNGVPAQKLLIGFPTYGRTFRNPN 275

  Fly   308 DSG-DSGMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYG 371
            .|. |.|:||    .|...||..:::.|...:.|||:.:...:.:.......|            
 Frog   276 PSNCDVGIPV----SGAGSAGQYTREAGFWAYYEICTWLSGTTINWIADQKVP------------ 324

  Fly   372 SYAFRAADENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRA 435
             ||.:..:       |:.:|:.||...|..:.:.....|..::.:..|||.|. |...::|::..
 Frog   325 -YACKGNE-------WVGFDNQDSYECKVKFLKESGFAGAMVWAIDLDDFSGTFCNQGKYPLISH 381

  Fly   436 IK 437
            :|
 Frog   382 LK 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 101/436 (23%)
Glyco_18 27..419 CDD:214753 94/414 (23%)
chit1NP_001005792.1 GH18_chitolectin_chitotriosidase 24..386 CDD:119351 101/435 (23%)
CBM_14 442..491 CDD:366726
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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