DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and Cda4

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_728468.1 Gene:Cda4 / 33144 FlyBaseID:FBgn0052499 Length:486 Species:Drosophila melanogaster


Alignment Length:183 Identity:37/183 - (20%)
Similarity:59/183 - (32%) Gaps:72/183 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CFYDSQGSQRQG------LAQFSMIDIELALQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHL 87
            ||....|:|..|      :.|..|:..:             ..||.:||:             |.
  Fly   111 CFCSKDGTQIPGDLEPEKIPQIIMLTFD-------------GAVNLNNYQ-------------HY 149

  Fly    88 AQITSMKERYPH---IK--FLLSVGGDADTYEGNQYIKLLESGQQGHRRFIES------------ 135
            .:|...|.:.|:   |:  |.:|       :|.:.|.::...|..||....||            
  Fly   150 QKIFDGKRKNPNGCLIRGTFFMS-------HEYSNYQQIQHLGYYGHEIGTESISQQQGLQDKGY 207

  Fly   136 ---------ARDLVRRY-NFDGLDLA------LQLPRNKPRKVHGDVGSAWKS 172
                     .|:::|.: |....|:.      |:..||...||..|.|..:.|
  Fly   208 EEWVGEMIGMREILRHFANVSVNDVVGMRAPFLKPGRNTQYKVLEDFGYIYDS 260

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 37/183 (20%)
Glyco_18 27..419 CDD:214753 37/183 (20%)
Cda4NP_728468.1 CBM_14 33..80 CDD:279884
CE4_CDA_like_1 130..396 CDD:200596 32/164 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463793
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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