DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and RGD1309110

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_006233175.1 Gene:RGD1309110 / 295352 RGDID:1309110 Length:440 Species:Rattus norvegicus


Alignment Length:448 Identity:120/448 - (26%)
Similarity:203/448 - (45%) Gaps:78/448 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNY 71
            |...:.|.:|...::.:|..|:|::::....:..:....:.||:..|  ||||:|.:||:..:| 
  Rat    21 LVFIMGLNLLLNVQLDSAYQLMCYFNNWPQYQPDVRGMKLDDIDPCL--CTHLIYSFAGIWENN- 82

  Fly    72 EMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESA 136
              .::.||.||:.  ..:...:|:|...:|.|||:|  ...:|...:|.::.:.:..| .||.|.
  Rat    83 --NTMTKRKDLDD--YKEFNDLKKRNNKLKTLLSIG--CWNFEAGLFITMVSTPESRH-TFITSV 140

  Fly   137 RDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKF--FTGDFIVDTESETHKGQVTALIK 199
            |..:|:|.||||:||.|.|        |..||..|....|  .|.:.....|.|..|.:.:.|| 
  Rat   141 RKFLRKYGFDGLNLAWQYP--------GCYGSPPKDKHLFTILTQEIRKAFEKEVSKNKKSRLI- 196

  Fly   200 DLSAALKQNDLLLSLTVLPNVNSSWYYDAPSIAPSLDFINL------GTFDFLTPQRNPEEADFS 258
             ::||       |:..:.|   ..:.|..|.::.|||:|.:      |::|..|.:.:|.   :.
  Rat   197 -ITAA-------LAGVISP---IQFGYHVPQLSQSLDYIQVMTYDLHGSWDGYTGENSPL---YK 247

  Fly   259 APTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPSTQGP 323
            :|....|    ...||:.:.|.:|..:.|...|:.:|...||.::.:| ||..:.:. .||.:|.
  Rat   248 SPAETGV----KAFYNIKYTMHNWKNKGVSPEKLIVGFPAYGHTFILS-DSTKTEIG-APSNRGG 306

  Fly   324 APAGPQSKQEGLLNWAEICSLMPNPS----NSNARGPNAPVKRVVDPTKRYGSYAFRAADENGDH 384
            .| ||.:|:.|...:.|||:.:.|.:    |:..:.|                |||        |
  Rat   307 HP-GPYTKKTGFWAYYEICAFLKNGAIQVWNAAQQVP----------------YAF--------H 346

  Fly   385 G-LWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRAIKYRL 440
            | .|:.||:..|...||.:.:..|.||..::.:..||:.|. |....||:...:|..|
  Rat   347 GNEWVGYDNVKSFHIKAQWLKNNNFGGAMIWAIGMDDYTGSFCDQGPFPLTSTLKNAL 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 115/427 (27%)
Glyco_18 27..419 CDD:214753 108/404 (27%)
RGD1309110XP_006233175.1 GH18_chitolectin_chitotriosidase 41..404 CDD:119351 115/426 (27%)
Glyco_18 43..382 CDD:214753 107/402 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350371
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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