DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and Chit1

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:447 Identity:128/447 - (28%)
Similarity:221/447 - (49%) Gaps:81/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLALS-LAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNY 71
            ||||: :..|...:..:|..|.|::.:....|.|.|:|...|::..|  |||::|.:||:|  |:
  Rat     4 SLALAGVTTLLMIQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNL--CTHVIYAFAGLN--NH 64

  Fly    72 EMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESA 136
            ::.::...   ::....::.|:|:|.|.:|.||:|||.:   .|.|....:.:.....:.|:.||
  Rat    65 QVSTVEPN---DELFYQELNSLKKRNPKLKTLLAVGGWS---FGTQKFTDMVATASTRQTFVNSA 123

  Fly   137 RDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDL 201
            ...:|.:.||||||..:.|.::                    |...||.|      :.||||:||
  Rat   124 LSFLRTHGFDGLDLDWEYPGSR--------------------GSPAVDKE------RFTALIQDL 162

  Fly   202 SAALKQ-------NDLLLSLTVLP----NVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEEA 255
            :.|.::       :.|||:..| |    :|::.  |:...|..|||||||..:||.:..  .:..
  Rat   163 AKAFQEEARASGKSRLLLTAAV-PTGRGHVDAG--YEVDKIVQSLDFINLMAYDFHSSW--DKTT 222

  Fly   256 DFSAPTYEAVGQ-NRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPS 319
            ..::|.|:..|: .:....|::..:..||.:..||:|:.:|:..||||:.:: .|.|||:. .|:
  Rat   223 GHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLGMPAYGRSFTLA-SSSDSGVG-APA 285

  Fly   320 TQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYAFRAADENGDH 384
            | ||...||.:|::|:|.:.|:||.         :|.    :|:.|....|.|        .|:.
  Rat   286 T-GPGAPGPYTKEKGILVYFEVCSW---------KGK----QRIEDQKVPYVS--------QGNQ 328

  Fly   385 GLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRAIKYRL 440
              |:.:||.:|..:||.|.:.:.|||..::.|..|||:|. |...::|::|.:...|
  Rat   329 --WVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQEL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 121/426 (28%)
Glyco_18 27..419 CDD:214753 114/403 (28%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 121/425 (28%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350395
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.950

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