DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and Chit1

DIOPT Version :10

Sequence 1:NP_477256.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:447 Identity:128/447 - (28%)
Similarity:221/447 - (49%) Gaps:81/447 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SLALS-LAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNY 71
            ||||: :..|...:..:|..|.|::.:....|.|.|:|...|::..|  |||::|.:||:|  |:
  Rat     4 SLALAGVTTLLMIQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNL--CTHVIYAFAGLN--NH 64

  Fly    72 EMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESA 136
            ::.::...   ::....::.|:|:|.|.:|.||:|||.:   .|.|....:.:.....:.|:.||
  Rat    65 QVSTVEPN---DELFYQELNSLKKRNPKLKTLLAVGGWS---FGTQKFTDMVATASTRQTFVNSA 123

  Fly   137 RDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDL 201
            ...:|.:.||||||..:.|.::                    |...||.|      :.||||:||
  Rat   124 LSFLRTHGFDGLDLDWEYPGSR--------------------GSPAVDKE------RFTALIQDL 162

  Fly   202 SAALKQ-------NDLLLSLTVLP----NVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEEA 255
            :.|.::       :.|||:..| |    :|::.  |:...|..|||||||..:||.:..  .:..
  Rat   163 AKAFQEEARASGKSRLLLTAAV-PTGRGHVDAG--YEVDKIVQSLDFINLMAYDFHSSW--DKTT 222

  Fly   256 DFSAPTYEAVGQ-NRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPS 319
            ..::|.|:..|: .:....|::..:..||.:..||:|:.:|:..||||:.:: .|.|||:. .|:
  Rat   223 GHNSPLYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLGMPAYGRSFTLA-SSSDSGVG-APA 285

  Fly   320 TQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYAFRAADENGDH 384
            | ||...||.:|::|:|.:.|:||.         :|.    :|:.|....|.|        .|:.
  Rat   286 T-GPGAPGPYTKEKGILVYFEVCSW---------KGK----QRIEDQKVPYVS--------QGNQ 328

  Fly   385 GLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRAIKYRL 440
              |:.:||.:|..:||.|.:.:.|||..::.|..|||:|. |...::|::|.:...|
  Rat   329 --WVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQEL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_477256.1 GH18_IDGF 26..440 CDD:119352 121/426 (28%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 121/425 (28%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.

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