DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf3 and Chil5

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001074285.1 Gene:Chil5 / 229687 MGIID:2676649 Length:431 Species:Mus musculus


Alignment Length:454 Identity:120/454 - (26%)
Similarity:201/454 - (44%) Gaps:88/454 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNY 71
            |.|...||:|...::.:|..|:|:|::....|..|..|:..||:..|  ||||:|.:||:..:..
Mouse     4 LILVTGLALLLNPQLGSAYQLMCYYNNVAQNRPKLGSFNPADIDPCL--CTHLIYAFAGMQNNKV 66

  Fly    72 EMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESA 136
            .|:|:|...|.:     .:.::|.|...:|.||::|| .|.  |......:.|.....:.||.||
Mouse    67 TMRSMNDLTDYQ-----ALNTLKSRNVQLKTLLAIGG-RDF--GPAPFSAMVSTPHNQQTFINSA 123

  Fly   137 RDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDL 201
            ...:|:|.||||:|..|.|        |..||..:. |..|                 |.|::.:
Mouse   124 IKFLRQYGFDGLNLDWQFP--------GSRGSPSRD-KHLF-----------------TVLVQKI 162

  Fly   202 SAAL-------KQNDLLLSLT---VLPNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEEAD 256
            ..|.       |...|:::.|   |:..:.|.  |:.|.::..||:|.:.|::....|..  ...
Mouse   163 REAFELEAIENKSPRLMVTATVAGVISTIQSG--YEIPQLSHFLDYIQVMTYNLHGSQDG--YTG 223

  Fly   257 FSAPTYEAV---GQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVP 318
            .::|.|:::   |.|.|  .|:::.|.:|........|:.:|...||:::.:| |..::|:....
Mouse   224 ENSPLYKSLNDTGINTL--LNVDYIMTYWNENGAAPEKLIVGFPAYGQTFTLS-DPSNNGISAPT 285

  Fly   319 STQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGS-----YAFRAA 378
            ::.|  ..||.:::.|...:.||||.:    |..|             |:.:.|     ||::. 
Mouse   286 ASAG--TLGPYTEESGTWAYYEICSFL----NDGA-------------TEAWDSAQEVPYAYQG- 330

  Fly   379 DENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRAIKYRLL 441
                  ..|:.||:..|...||.:.:..||||..|:.|..|||.|. |...:||:...:|..||
Mouse   331 ------NKWVGYDNVKSFRIKAEWLKQNNLGGAMLWTLDMDDFTGSFCNQGQFPLTSTLKNALL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 112/432 (26%)
Glyco_18 27..419 CDD:214753 104/409 (25%)
Chil5NP_001074285.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 112/431 (26%)
Glyco_18 26..365 CDD:214753 103/407 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846851
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.