DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and cht-4

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_497437.2 Gene:cht-4 / 189507 WormBaseID:WBGene00021252 Length:360 Species:Caenorhabditis elegans


Alignment Length:445 Identity:97/445 - (21%)
Similarity:171/445 - (38%) Gaps:109/445 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDI-ELALQFCTHLVYGYAGVNADN 70
            |..:|.|.:|....|..|    |:|           ..:..|| ::....|||::...:...:::
 Worm     4 LIFSLLLLILPVHTVPVA----CYY-----------ILNQPDISKVPKNLCTHIILINSAHVSED 53

  Fly    71 YEMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIES 135
            ..:|...:  |||  |.:::...|     |:..:|:      ...|.....|.|.......|..:
 Worm    54 GRLQGFEQ--DLE--HFSELFDGK-----IELFVSI------TSSNPSFSFLTSNTTLMHNFSST 103

  Fly   136 ARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKD 200
            ...::::|..:|:|:..:.|             .|..           |.: ::.|......::.
 Worm   104 VTQVLQKYRLNGVDIDWEFP-------------VWSR-----------DAQ-KSDKAHFATFLRI 143

  Fly   201 LSAALKQNDLLLSLTVL-PNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQR--NPEEADFSAPTY 262
            |.:.||..||.||:.|. |...|...||..::....|.:.:..:||....|  || ...|:||.:
 Worm   144 LKSHLKPADLKLSVAVSGPPTISRKAYDVDALKMYADMVQIMNYDFHVFNRYSNP-FVGFNAPLH 207

  Fly   263 EAVGQ-NRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWK-----MSKDSGDSGMPVVPSTQ 321
            ....: :.||..|....|:.|....:|.|....||.||.|:::     :.|       |..|:.:
 Worm   208 PMRAEISVLGEMNAEASMKTWYDLGLPRNISFFGIPTYARAFQLLTHYLHK-------PYSPAIR 265

  Fly   322 GPAPAGPQSKQEGLLNWAEICSLMPNPS-----NSNARGPNAPVKRVVDPTKRYGSYAFRAADEN 381
                |.|:     :.|..::|....:..     |.:|:.|                |.:      
 Worm   266 ----ARPE-----ITNLPDVCIFAQSGYYTTVWNHHAQAP----------------YLY------ 299

  Fly   382 GDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQCTNDRFPMLRAI 436
            ||.|:|:||::..|..:|..:||...:|||.:|.:..||..|:|.:..:|:|..|
 Worm   300 GDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSIGSDDVTGKCGHGPYPLLTKI 354

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 91/426 (21%)
Glyco_18 27..419 CDD:214753 84/406 (21%)
cht-4NP_497437.2 GH18_chitinase-like 30..357 CDD:385673 89/404 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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