DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and chil-26

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001317724.1 Gene:chil-26 / 188615 WormBaseID:WBGene00011847 Length:345 Species:Caenorhabditis elegans


Alignment Length:301 Identity:53/301 - (17%)
Similarity:119/301 - (39%) Gaps:88/301 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 IELALQFCTHLVYGYAGVNADNYEMQ---SINKR----LDLEQRHLAQITSMKERYPHIKFLLSV 106
            ::::..|.|:.|:.:|.:|. |..:|   :|:|:    |:.:.:|:..         ::..:||:
 Worm    74 VKVSYIFDTYAVFAFAQLNT-NGSLQFESAISKQKFLNLNRKSKHINN---------NVNRILSI 128

  Fly   107 GGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDGLDLA----------------LQLP 155
            ||  ..|  ::.:.::....:..||||.|....::....||::|.                |::.
 Worm   129 GG--TNY--SEKLSIMLQDLKKTRRFIMSIIRFLKDNELDGVELLWNRNTEETLYCELLQHLKMG 189

  Fly   156 RNKPRKVHG--------DVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLSAALKQNDLLL 212
            ..|..|.:.        .:|       |:..|..:.|.|:...       |..:|.|..:|.|..
 Worm   190 LEKQEKQYSISLRVPQTGIG-------KWHIGCELEDQENADS-------INLISMAEYENQLFG 240

  Fly   213 S---LTVLPNVNSSW---YYDAPS--------IAPSLDFINLGTFDFLTPQRNPEEAD---FSAP 260
            |   :.:....|::|   |:...|        :.|:::........::.   |||:.:   |::.
 Worm   241 SGGVIRISEAFNTAWEMKYHACNSNQSSKFNLVIPTIEQTEQIDMQYVW---NPEKKEIQRFNSS 302

  Fly   261 TYEAVGQNRLG---------HYNLNFQMEHWLLQRVPANKI 292
            |.....:.::|         .|:.|.|::.:..:|:.:.::
 Worm   303 TKTEYTKLQMGGVSIWSRDMDYHNNIQLDSYFFERICSQEL 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 53/301 (18%)
Glyco_18 27..419 CDD:214753 53/301 (18%)
chil-26NP_001317724.1 Glyco_18 82..323 CDD:214753 48/271 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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