DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and chil-4

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_496125.1 Gene:chil-4 / 182434 WormBaseID:WBGene00007469 Length:457 Species:Caenorhabditis elegans


Alignment Length:412 Identity:78/412 - (18%)
Similarity:150/412 - (36%) Gaps:110/412 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQ 117
            ||..||::|.:|.....|........|...|:..    ...::....:|.::|:||.::    ::
 Worm   129 LQMLTHIIYLFAIPKNGNMTFGGERSRRKFEEMK----NEARKANSTLKVMISIGGQSN----SR 185

  Fly   118 YIKLLESGQQGHRRFIESARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFI 182
            ....|.|.:.....|:.|....|::|:.||:::....|:.:.                  ..:::
 Worm   186 SFSRLVSNETSRNVFVNSIVSFVQKYDIDGIEIFWTWPKYED------------------ANNYL 232

  Fly   183 VDTESETHKGQVTALIKDLSAAL--------KQNDLLLSLTVLPNVNSSWYYDAPSIAPSLDFIN 239
            :             .|::|..|.        ::.|.::|:.|  |...:...:....:..:||.|
 Worm   233 I-------------FIQELRYAFIELQKKLNRKEDYVISIIV--NCYDNQLSNLMGFSKFVDFFN 282

  Fly   240 LGTFDFLTPQRNPEEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWK 304
            :.:..:.:.|..|     |:|.|..      |..|::..|::::.:....:|.|:.:..:|..||
 Worm   283 IYSIHYQSRQVGP-----SSPLYGG------GSRNIDETMKYYICRTGQPSKFNMMVLFHGTFWK 336

  Fly   305 -----MSKDSGDSGMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVV 364
                 :..||.|     :...|..|..|      ..:.|.|:  |......||.:..|.      
 Worm   337 GAELPLRNDSDD-----IFKDQNSAKGG------FAVRWREL--LQQKWDMSNIKFHNL------ 382

  Fly   365 DPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ----- 424
              ||.  ||.:....     .|:::.:|..|...|..|....|:||:.::.:.|||  |.     
 Worm   383 --TKT--SYMWIPGS-----SLFLTLEDEQSLRVKNRYVADHNIGGITMWTIDQDD--GDHTLLK 436

  Fly   425 -------CTNDRFPMLRAIKYR 439
                   ||.|.   ...||::
 Worm   437 VVSSAELCTGDE---KNTIKFK 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 78/412 (19%)
Glyco_18 27..419 CDD:214753 69/378 (18%)
chil-4NP_496125.1 Glyco_18 111..428 CDD:214753 69/378 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164483
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG58170
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.710

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