DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and cht-1

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:432 Identity:103/432 - (23%)
Similarity:181/432 - (41%) Gaps:85/432 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 CFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNYEMQSINKRLDLE-----QRHLA 88
            |::.:....|||.|:|...|....|  |||:::.:..:||| |.:::.:. .||.     :....
 Worm    57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNAD-YTVRAYDP-ADLPNDWAGEGMYR 117

  Fly    89 QITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDGLDLALQ 153
            ::..:|.....:|.|||.||.:   .|....:.:.:.....:.||:||...||.:.|||:|:..:
 Worm   118 RVNKLKVTDTQLKTLLSFGGWS---FGTALFQGMAASSASRKVFIDSAITFVRTWGFDGIDIDWE 179

  Fly   154 LPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLSAALK-------QNDLL 211
            .|                              ...|......||:|:|.||.:       ::.||
 Worm   180 YP------------------------------SGATDMANYVALVKELKAACESEAGSTGKDRLL 214

  Fly   212 LSLTVL---PNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEEADFSAPTYEAVG-QNRLGH 272
            ::..|.   ..:::.  ||.|::||:.|||.|.::||.....:  ...|::|.|.... ......
 Worm   215 VTAAVAAGPATIDAG--YDIPNLAPNFDFILLMSYDFFGAWAS--LVGFNSPLYATTELPAEWNG 275

  Fly   273 YNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPSTQG-PAPAGPQSKQEGLL 336
            :|::....:|..:.:|..||.:|:.||||.|.::..|.     :.|.|.| ||......::.|:.
 Worm   276 WNVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASA-----INPGTSGSPAKITQYVQEAGVG 335

  Fly   337 NWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKAM 401
            .:.|.|.::.|.:                 |:.:.|.:.......|:.  |.||||.:|.::|..
 Worm   336 AYFEFCEMLANGA-----------------TRYWDSQSQVPYLVQGNQ--WWSYDDEESFANKMA 381

  Fly   402 YARARNLGGVALFDLTQDDFRGQCTNDR---FPMLRAIKYRL 440
            |.:....||..::.|..|||...|:|..   :|::..|...|
 Worm   382 YVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAKEL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 102/430 (24%)
Glyco_18 27..419 CDD:214753 95/406 (23%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 102/430 (24%)
Glyco_18 57..399 CDD:214753 95/406 (23%)
CBM_14 481..532 CDD:279884
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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