DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and cht-3

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:426 Identity:94/426 - (22%)
Similarity:168/426 - (39%) Gaps:97/426 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 VCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITS 92
            :|:.|.     :.:.:...|| .|...:|:|:|..|..::..: :|...:|..||    :.:|..
 Worm   375 LCYLDP-----EEVEETFPID-NLKSDYCSHIVVPYFALDLSD-KMIEEDKAEDL----VKKIDD 428

  Fly    93 MKERYPHI--KFLLSVGG-DADTYEGNQYIKLLESGQQGHRRFIESARDLVRRY---NFDGLDLA 151
            .:.:...:  :.:||||. .|.|..  |::    .|...||:  |.|..||:..   |.|||:: 
 Worm   429 WRSKIVEVAPRLILSVGSKQASTIW--QFL----LGNDFHRK--ELAEGLVKAINSTNADGLEI- 484

  Fly   152 LQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLSAALKQNDLLLSLTV 216
                             :|.|  :....||        .|..:.:.|.|:.||  ....::.:.|
 Worm   485 -----------------SWTS--QPMVSDF--------DKKNLKSFINDIVAA--DTAKMVEIVV 520

  Fly   217 LPNVNSSW--YYDAPSIAPSLDFINLGTF----DFL--TPQRNPEEADFSAPTYEAVGQNRLGHY 273
            ..:..|::  :||...:..:...|.|.:.    |.|  |...:|..|. |:.|.:.:....|   
 Worm   521 ATSQQSAYSDFYDYEHLNKTASLIVLHSHRLHSDSLPFTGHPSPLRAT-SSMTNQKMSWESL--- 581

  Fly   274 NLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDSGMPVVPSTQGPAPAGPQSKQEGLLNW 338
                 :.||:.:||..:|:.:.::....|.:...|...|.  ..|..|....:..:||:..:.:.
 Worm   582 -----LSHWVEKRVLPSKLVLSLSASTLSMQSLADVRSSA--ATPFGQSAFVSMLRSKKGDIHSQ 639

  Fly   339 AEICSLMPNPSNSN--ARGPNAPVKRVVDPTKRYGSYAFRAADENGDHGLWISYDDPDSASSKAM 401
            .|||..:.:.:...  ..|...|..|      ||..              .::|::..||..||:
 Worm   640 QEICESLKSGTGVTHWVDGAEVPYLR------RYDQ--------------MVAYENTRSAHIKAV 684

  Fly   402 YARARNLGGVALFDLTQDDFRGQCTN-DRFPMLRAI 436
            :|....:||:||.::.|||....|.| ..||:|.|:
 Worm   685 WASMEGVGGLALHNMHQDDPSAVCDNRTAFPILNAL 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 94/426 (22%)
Glyco_18 27..419 CDD:214753 85/406 (21%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753
GH18_chitinase-like 51..>103 CDD:299167
Glyco_18 375..702 CDD:214753 85/406 (21%)
GH18_chitinase-like 387..723 CDD:299167 92/409 (22%)
Glyco_hydro_18 761..1043 CDD:279094
GH18_chitinase-like <1018..1062 CDD:299167
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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