DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and btb-17

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_872000.1 Gene:btb-17 / 173673 WormBaseID:WBGene00018200 Length:321 Species:Caenorhabditis elegans


Alignment Length:187 Identity:40/187 - (21%)
Similarity:73/187 - (39%) Gaps:45/187 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LQFCTHLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITSM-----KERYPHIKFLLSVGGDADT 112
            :.|.....|..||    |.::..|...:|::.|. .|::.|     .:.:..:..|:|:.....|
 Worm    61 INFTWKFEYDEAG----NEDIDEIAGTIDVKFRR-NQVSGMFQTGQNQNFTTVHTLVSLTEHCQT 120

  Fly   113 YEGNQYIKLLESGQQGHRRFIESARDLV-----RRYNFDGLDLALQLPRNK------PRKVHGDV 166
                 ..||:|...|.....:.....||     .:::||  ::.|...:|.      .||:|  |
 Worm   121 -----LTKLVEVPNQPGAVEVMYVYALVPWINPLQFSFD--EMFLSSKKNDAVLVIGERKLH--V 176

  Fly   167 GSAWKS-----FKKFFTGDFIVDTESETHKGQVTALIKDLSAALKQNDLLLSLTVLP 218
            ..|:.|     |:..|:.:|..|.:.|..       :||:   :.::..||..|:.|
 Worm   177 NKAFLSYHSDYFRALFSSNFKEDKQDEIE-------LKDV---VYEDFGLLMTTIYP 223

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 40/187 (21%)
Glyco_18 27..419 CDD:214753 40/187 (21%)
btb-17NP_872000.1 BTB 164..260 CDD:197585 17/72 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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