DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and chil-24

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_494455.1 Gene:chil-24 / 173661 WormBaseID:WBGene00020407 Length:410 Species:Caenorhabditis elegans


Alignment Length:379 Identity:73/379 - (19%)
Similarity:140/379 - (36%) Gaps:90/379 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 THLVYGYAGVNADNYEMQSINKRLDLEQRHLAQITSMKERY--PHIKFLLSVGGDADTYEGNQYI 119
            ||.|:.|..:..|.    |:..:.|..:...:.:.....|.  .::|.::|:||    :|.:|:.
 Worm    77 THAVFAYVQMKFDG----SLGFKNDAARIRFSNLRDKVRRNEDSNVKMMISIGG----FENSQHF 133

  Fly   120 KLLESGQQGHRRFIESARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVD 184
            ..:.|..:..:.|:.|....:..:...|:|:..:.| :...|.|         :.:|.       
 Worm   134 YPVLSNVEMKKAFLNSISSFLAYHELHGVDIFWKWP-SPEDKAH---------YSRFL------- 181

  Fly   185 TESETHKGQVTALIKDLSAALKQN---DLLLSLTVLPNV---NSSWYYDAPSIAPSLDFINLGTF 243
                              |.|:|:   :.::|:.| |..   |....||..:|:..:||.|:.:.
 Worm   182 ------------------ADLRQHLGYEFIISVAV-PQAEVSNLELGYDLRTISSHVDFFNVHSM 227

  Fly   244 DFLTPQRNPEEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKD 308
            |:..|..| |....:.|.....|..|   :|:::.:.::..:.....|:|:.|..:.|.||...:
 Worm   228 DYYGPWPN-EWGKPTGPISPLYGPTR---HNVDWTLRYYAEKTGEPGKLNMVIPFFVRLWKNVPE 288

  Fly   309 SGDSGMPVVPST-------QGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDP 366
            ..:.|..|....       ||.|.....|.|.      |...|.|...:...|            
 Worm   289 PVEPGRQVFRDVELVDNKPQGEAYMSRWSAQH------EELDLSPADWDEETR------------ 335

  Fly   367 TKRYGSYAFRAADENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDD 420
                .||.:     |.|...:::::...|...|..|.:.:|||||.::.:..::
 Worm   336 ----SSYTW-----NPDTRNFVTFETDKSIQEKMKYVKEKNLGGVWIWHVDANE 380

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 73/379 (19%)
Glyco_18 27..419 CDD:214753 73/376 (19%)
chil-24NP_494455.1 Glyco_18 55..378 CDD:214753 73/375 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160164492
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.700

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