DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf3 and Chia

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_997469.1 Gene:Chia / 113901 RGDID:1303058 Length:473 Species:Rattus norvegicus


Alignment Length:455 Identity:124/455 - (27%)
Similarity:198/455 - (43%) Gaps:92/455 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSLALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQFSMIDIELALQFCTHLVYGYAGVNADNY 71
            |.|...|.:|...::.:|.||||::.:....|.||..|...||...|  ||||:|.:||      
  Rat     4 LILVTGLVLLLNVQLGSAYNLVCYFTNWAQYRPGLGSFKPDDINPCL--CTHLIYAFAG------ 60

  Fly    72 EMQSINKRLDLEQRHLA---QITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFI 133
             ||: |:...:|...:.   ....:|.|...:|.||::||   ...|......:.|..|..:.||
  Rat    61 -MQN-NQITTIEWNDVTLYKAFNDLKNRNSKLKTLLAIGG---WNFGTAPFTTMVSTSQNRQTFI 120

  Fly   134 ESARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALI 198
            .|....:|:|.||||||..:.|        |..||..:. |..|                 |.|:
  Rat   121 TSVIKFLRQYGFDGLDLDWEYP--------GSRGSPPQD-KHLF-----------------TVLV 159

  Fly   199 KDLSAALKQN-------DLLLSLTV---LPNVNSSWYYDAPSIAPSLDFINL------GTFDFLT 247
            |:|..|.:|.       .|:::..|   :.|:.:.  |:.|.::..||||::      |::|..|
  Rat   160 KELREAFEQEAIESNRPRLMVTAAVAAGISNIQAG--YEIPELSQYLDFIHVMTYDLHGSWDGYT 222

  Fly   248 PQRNPEEADFSAPTYEAVGQNRLGHYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDSGDS 312
            .:.:|.   :..||  ..|.|  .:.|:::.|.:|.....||.|:.:|...||.::.:|..| |:
  Rat   223 GENSPL---YKLPT--ETGSN--AYLNVDYVMNYWKDNGAPAEKLIVGFPEYGHTYILSNPS-DT 279

  Fly   313 GMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGP-NAPVKRVVDPTKRYGSYAFR 376
            |  :...|.|..||||.::|.|...:.|||:.:.|.:..:...| ..|             ||::
  Rat   280 G--IGAPTSGNGPAGPYTRQAGFWAYYEICTFLRNGATQDWDAPQEVP-------------YAYK 329

  Fly   377 AADENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPMLRAIKYRL 440
            ..:       |:.||:..|.|.||.:.:..|.||..::.:..|||.|. |...:||:...:...|
  Rat   330 GNE-------WVGYDNIKSFSVKAQWLKQNNFGGAMIWAIDLDDFTGSFCDQGKFPLTSTLNKAL 387

  Fly   441  440
              Rat   388  387

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 118/434 (27%)
Glyco_18 27..419 CDD:214753 110/411 (27%)
ChiaNP_997469.1 GH18_chitolectin_chitotriosidase 24..387 CDD:119351 117/433 (27%)
Glyco_18 24..365 CDD:214753 110/411 (27%)