DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf3 and chia.5

DIOPT Version :9

Sequence 1:NP_001285982.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001103511.2 Gene:chia.5 / 100003900 ZFINID:ZDB-GENE-071004-113 Length:481 Species:Danio rerio


Alignment Length:450 Identity:125/450 - (27%)
Similarity:202/450 - (44%) Gaps:106/450 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 ALSLAVLAQFKVSAAPNLVCFYDSQGSQRQGLAQF--SMIDIELALQFCTHLVYGYAGVNADN-- 70
            :.||| |..|  ..|..|:|::.:....|..:.::  |.:|..|    ||||:|.::.:|.:|  
Zfish     9 SFSLA-LCHF--GLASQLICYFTNWSQYRPDVGKYMPSNVDPHL----CTHLIYAFSIINNENKL 66

  Fly    71 --YE------MQSINKRLDLEQRHLAQITSMKERYPHIKFLLSVGGDADTYE-GNQYIKLLESGQ 126
              ||      .||.|              .:|:...::|.||:|||    :| |:.....:.|..
Zfish    67 TTYEWNDETLYQSFN--------------GLKQSNSNLKTLLAVGG----WEFGSAQFSSMVSMP 113

  Fly   127 QGHRRFIESARDLVRRYNFDGLDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHK 191
            |..:.||:|:...:|.:.||||||..:.|        |..||..:..::|               
Zfish   114 QNRQTFIQSSITFLRTHGFDGLDLDWEYP--------GSRGSPPEDKQRF--------------- 155

  Fly   192 GQVTALIKDL-------SAALKQNDLLLSLTV--LPNVNSSWYYDAPSIAPSLDFINLGTFDFLT 247
               |.|.|:|       |||..:..|:|:..|  :..:..:. |:...||..|||||:.|:||..
Zfish   156 ---TLLCKELVEAYQAESAATGRPRLMLTAAVAAVKGIIDAG-YEIAEIAKYLDFINIMTYDFHG 216

  Fly   248 PQRNPEEADFSAPTYEAVGQNRLG---HYNLNFQMEHWLLQRVPANKINIGIATYGRSWKMSKDS 309
            .|.|  ....::|.|...|..  |   :||.:|.|.:|..|..|..|:.:|.|.|||::::|  |
Zfish   217 SQDN--ITGHNSPLYRDSGDT--GDQIYYNTDFAMNYWRDQGAPVEKLRMGFAAYGRTFRLS--S 275

  Fly   310 GDSGMPVVPSTQGPAPAGPQSKQEGLLNWAEICSLMPNPSNSNARGPNAPVKRVVDPTKRYGSYA 374
            .|:|:....|  |.|.||..:::.|..::.|||:.:          ..|.|:::||....|.:  
Zfish   276 ADNGVGAPAS--GAALAGTYTREAGFWSYYEICTFL----------QGAIVQQIVDQKVPYAT-- 326

  Fly   375 FRAADENGDHGLWISYDDPDSASSKAMYARARNLGGVALFDLTQDDFRGQ-CTNDRFPML 433
                  .|..  |:.:||.:|..:|..|.:.:..||..::.|..|||.|| |...::|::
Zfish   327 ------KGQE--WVGFDDQESYETKVDYLKEKGFGGAFVWSLDLDDFSGQFCGQGKYPLI 378

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_001285982.1 GH18_IDGF 26..440 CDD:119352 119/433 (27%)
Glyco_18 27..419 CDD:214753 112/416 (27%)
chia.5NP_001103511.2 Glyco_18 22..363 CDD:214753 112/417 (27%)
GH18_chitolectin_chitotriosidase 23..381 CDD:119351 119/432 (28%)
CBM_14 433..479 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592056
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.830

Return to query results.
Submit another query.