DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf3 and si:ch211-226m16.2

DIOPT Version :10

Sequence 1:NP_477256.1 Gene:Idgf3 / 34981 FlyBaseID:FBgn0020414 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001191302.1 Gene:si:ch211-226m16.2 / 100003708 ZFINID:ZDB-GENE-030131-2302 Length:410 Species:Danio rerio


Alignment Length:280 Identity:53/280 - (18%)
Similarity:96/280 - (34%) Gaps:73/280 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 VSAAPNLVCFYDSQGSQRQGLAQFSMIDI---ELALQFCTHLVYGYAGVNADNYEMQSINKRLDL 82
            :|.|...:|...|.|:||........:|:   ......|||::......:.:.|.........|.
Zfish     3 ISRAFAFLCLVVSVGAQRTQSRLSCYLDVLTPHTREGSCTHIILPSVSSDDELYLQSLTENEYDA 67

  Fly    83 EQRHLAQITSMKERYPHIKFLLSVGGDADTYEGNQYIKLLESGQQGHRRFIESARDLVRRYNFDG 147
            .||       ||||...:|.||.:...:..      :||:.:.:.....||::....::....||
Zfish    68 IQR-------MKERNSALKILLGLEIKSSR------LKLMSANEASVGSFIQTLLTYLKEKRLDG 119

  Fly   148 LDLALQLPRNKPRKVHGDVGSAWKSFKKFFTGDFIVDTESETHKGQVTALIKDLSAALKQ--NDL 210
            ||:                  .|           :..|.|:|.  ..|..:|.:....::  ..|
Zfish   120 LDV------------------IW-----------LDGTPSDTE--LFTDFLKSIKGVFEEEMRPL 153

  Fly   211 LLSLTVL-PNVNSSWYYDAPSIAPSLDFINLGTFDFLTPQRNPEEADFSAPTYEAVGQNRLGHYN 274
            |||.:|. |...:...||...::..:|||:      :.|.:...:..:.:.|             
Zfish   154 LLSASVKEPTDKTVASYDEQILSQYVDFIS------ILPAQLQTDGQYISKT------------- 199

  Fly   275 LNFQMEHWLLQRVPANKINI 294
                .:||..::|...|:.:
Zfish   200 ----AQHWQDKQVDLQKLGL 215

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf3NP_477256.1 GH18_IDGF 26..440 CDD:119352 51/275 (19%)
si:ch211-226m16.2NP_001191302.1 GH18_chitinase-like 41..>185 CDD:471972 39/193 (20%)

Return to query results.
Submit another query.