DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5888 and TRIL

DIOPT Version :10

Sequence 1:NP_609794.1 Gene:CG5888 / 34980 FlyBaseID:FBgn0028523 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_055632.2 Gene:TRIL / 9865 HGNCID:22200 Length:811 Species:Homo sapiens


Alignment Length:498 Identity:105/498 - (21%)
Similarity:192/498 - (38%) Gaps:132/498 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 GCEAL--VKE---PNLCECQE-QEIKCENLQLHSDNLQLYGISCSIFDARGFGYIPPLKVGNIGS 89
            ||.||  :.|   |..|:||. |.:.|.|                    ||...:|         
Human    15 GCLALPPLAEPVCPERCDCQHPQHLLCTN--------------------RGLRVVP--------- 50

  Fly    90 LIVQNCAIPNAESIKYLLSKLGVSNYTELEIFNY------------------FDPKKTDRGEVLQ 136
               :..::|:...:  |...||.:..|.:..|::                  ..||..::...|:
Human    51 ---KTSSLPSPHDV--LTYSLGGNFITNITAFDFHRLGQLRRLDLQYNQIRSLHPKTFEKLSRLE 110

  Fly   137 QHYTDHE-----------SLKKVSIIGFK----STLPENFLENLPALQQLSLKGSS--DLPGNIL 184
            :.|..:.           .|:|:.|:...    |.|.....|.|.:|.:|.|.|::  .||..:.
Human   111 ELYLGNNLLQALAPGTLAPLRKLRILYANGNEISRLSRGSFEGLESLVKLRLDGNALGALPDAVF 175

  Fly   185 HPLKNLTHLEIV---VKNLGKVSGAIFAKQSKLKHLMIDCDAKNSSVEMSA-FGPQELWHMTELQ 245
            .||.||.:|.:.   ::.|||.:   ||:..||:.|.:..:....|:..:| |.|     :..|.
Human   176 APLGNLLYLHLESNRIRFLGKNA---FAQLGKLRFLNLSANELQPSLRHAATFAP-----LRSLS 232

  Fly   246 SIEL-FNCGDNVPTELFWMSEQLAYIGIRSN-ISYLSKDFLKVQKKLLTLRLERNNIARLPDQLF 308
            |:.| .|...::...:|....:|..:.:|.| :::|:.:.....:.|..||||.|.:::||..|.
Human   233 SLILSANNLQHLGPRIFQHLPRLGLLSLRGNQLTHLAPEAFWGLEALRELRLEGNRLSQLPTALL 297

  Fly   309 RNTPLILEIHLAFNNLDRIQSGLFDKLKNLQVLNLEHNPITTIALNAFTPIPTAHIYVGKL---- 369
            .....:..:.|:.|.|..:....|..|..|:.|:|.:|.::.::.:.|...|.  :|...|    
Human   298 EPLHSLEALDLSGNELSALHPATFGHLGRLRELSLRNNALSALSGDIFAASPA--LYRLDLDGNG 360

  Fly   370 ------FKAAKN--ADWARSTNATICEEEYIYGVCIYCK-----RDEYLDHFADSE----NCNKP 417
                  .:..|.  .||.        .:..:..|.:.|:     |.:|||:..|.:    :|..|
Human   361 WTCDCRLRGLKRWMGDWH--------SQGRLLTVFVQCRHPPALRGKYLDYLDDQQLQNGSCADP 417

  Fly   418 NPKAKDVLAKKAYENQLKAMPTHSWKK-------AKEYPVEEE 453
            :|.     |....:.:.:.:||.:.::       |:|.|.:.:
Human   418 SPS-----ASLTADRRRQPLPTAAGEEMTPPAGLAEELPPQPQ 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5888NP_609794.1 LRR <160..>359 CDD:443914 53/206 (26%)
leucine-rich repeat 168..189 CDD:275380 8/22 (36%)
leucine-rich repeat 190..213 CDD:275380 7/25 (28%)
leucine-rich repeat 214..243 CDD:275380 6/29 (21%)
leucine-rich repeat 244..266 CDD:275380 5/22 (23%)
leucine-rich repeat 267..289 CDD:275380 4/22 (18%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..337 CDD:275380 5/22 (23%)
leucine-rich repeat 338..357 CDD:275380 4/18 (22%)
TRILNP_055632.2 leucine-rich repeat 37..61 CDD:275380 7/55 (13%)
LRR 61..>344 CDD:443914 66/292 (23%)
LRR 1 61..81 5/21 (24%)
leucine-rich repeat 62..84 CDD:275380 5/21 (24%)
LRR 2 84..105 2/20 (10%)
leucine-rich repeat 85..108 CDD:275380 2/22 (9%)
LRR 3 108..129 2/20 (10%)
leucine-rich repeat 109..132 CDD:275380 3/22 (14%)
LRR 4 132..153 4/20 (20%)
leucine-rich repeat 133..156 CDD:275380 5/22 (23%)
LRR 5 156..177 6/20 (30%)
leucine-rich repeat 157..180 CDD:275380 8/22 (36%)
LRR 6 180..201 7/23 (30%)
leucine-rich repeat 181..204 CDD:275380 7/25 (28%)
LRR 7 204..223 4/18 (22%)
leucine-rich repeat 205..254 CDD:275380 11/53 (21%)
LRR 8 230..251 5/20 (25%)
LRR 9 254..275 4/20 (20%)
leucine-rich repeat 255..278 CDD:275380 4/22 (18%)
LRR 10 278..299 9/20 (45%)
leucine-rich repeat 279..302 CDD:275380 9/22 (41%)
LRR 11 302..323 4/20 (20%)
leucine-rich repeat 303..326 CDD:275380 5/22 (23%)
LRR 12 326..347 5/20 (25%)
leucine-rich repeat 327..346 CDD:275380 4/18 (22%)
PCC 332..>401 CDD:188093 12/78 (15%)
leucine-rich repeat 351..363 CDD:275378 2/11 (18%)
PHA03378 <478..>579 CDD:223065
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..549
FN3 589..667 CDD:473895
Blue background indicates that the domain is not in the aligned region.

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