Sequence 1: | NP_001285981.1 | Gene: | CG5888 / 34980 | FlyBaseID: | FBgn0028523 | Length: | 455 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001381943.1 | Gene: | Lrrc55 / 311171 | RGDID: | 1561726 | Length: | 311 | Species: | Rattus norvegicus |
Alignment Length: | 298 | Identity: | 64/298 - (21%) |
---|---|---|---|
Similarity: | 98/298 - (32%) | Gaps: | 122/298 - (40%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 LLLLLSLIAPSWQENATVINPSYVTKAGCEALVKEPNLCECQEQEIKCENLQLHSDNLQLYGISC 68
Fly 69 SIFDARGFGYIP---PLKVGNIGSLIVQNCAIPNAESIKYLLSKLGVSNYTELEIFNYFDPKKTD 130
Fly 131 RGEVLQQHYTDHESLKKVSIIGFKSTLPENFLENLPALQQLSLKGSSDLPGNILHPLKNLTHLEI 195
Fly 196 VVKNLGKVSGAIFAKQSKLKHLMIDCDAKNSSVEMSAFGPQELWHMTELQSIELFNCGDNVPTEL 260
Fly 261 FWMSEQLAYIGIRSNISYLSKDFLKVQKKLLTLRLERN 298 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG5888 | NP_001285981.1 | leucine-rich repeat | 168..189 | CDD:275380 | 4/20 (20%) |
leucine-rich repeat | 190..213 | CDD:275380 | 7/22 (32%) | ||
leucine-rich repeat | 214..243 | CDD:275380 | 8/28 (29%) | ||
leucine-rich repeat | 244..266 | CDD:275380 | 1/21 (5%) | ||
leucine-rich repeat | 267..289 | CDD:275380 | 6/21 (29%) | ||
LRR_8 | 288..348 | CDD:290566 | 4/11 (36%) | ||
leucine-rich repeat | 290..313 | CDD:275380 | 4/9 (44%) | ||
leucine-rich repeat | 314..337 | CDD:275380 | |||
leucine-rich repeat | 338..357 | CDD:275380 | |||
Lrrc55 | NP_001381943.1 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR46473 |
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.100 |