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Protein Alignment CG5888 and Lrrc3c
DIOPT Version :9
Sequence 1: | NP_001285981.1 |
Gene: | CG5888 / 34980 |
FlyBaseID: | FBgn0028523 |
Length: | 455 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_038943323.1 |
Gene: | Lrrc3c / 287668 |
RGDID: | 1563281 |
Length: | 255 |
Species: | Rattus norvegicus |
Alignment Length: | 130 |
Identity: | 29/130 - (22%) |
Similarity: | 52/130 - (40%) |
Gaps: | 26/130 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 231 SAFGPQEL---WHMTELQSIELFNCGDNVPTELFWMSEQLAYIGIRSNISYLSKDFLKVQKKLLT 292
|...||.| .::.|....:.|.|. |:.:|.:........:||.
Rat 20 SVSSPQTLPQGCYIAEEAGEQTFRCS-------------------RAGLSAVPSGIPNDTRKLY- 64
Fly 293 LRLERNNIARLPDQLFRNTPLILEIHLAFNNLDRIQSGLFDKLK-NLQVLNLEHNPITTIALNAF 356
|:.|.:|.:|...|::.|.:.|:.|:.|.|..:....|..|: .|:.|:|..|.:.::.:.||
Rat 65 --LDANQLASVPAGAFQHLPALEELDLSHNVLVHLSGAAFQGLEATLRHLDLSANQLASVPVAAF 127
Fly 357 356
Rat 128 127
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR46473 |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 1.100 |
|
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