DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG5888 and CPN2

DIOPT Version :10

Sequence 1:NP_609794.1 Gene:CG5888 / 34980 FlyBaseID:FBgn0028523 Length:455 Species:Drosophila melanogaster
Sequence 2:NP_001073982.3 Gene:CPN2 / 1370 HGNCID:2313 Length:545 Species:Homo sapiens


Alignment Length:533 Identity:112/533 - (21%)
Similarity:184/533 - (34%) Gaps:154/533 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 WLLLLLSLIAPSWQENATVINPSYVTKAGCEALVKEPNLCECQEQEIKCENLQL--HSDNLQLYG 65
            |||         |.....:..|:.....||:..|:|   ..|.::|:....|.:  ::.|:....
Human     6 WLL---------WTSLLLLARPAQPCPMGCDCFVQE---VFCSDEELATVPLDIPPYTKNIIFVE 58

  Fly    66 ISCSIFDARGFGYIPPLKVGNIGSLIVQNCAI-PNAESIKYLLSKLGVSNYTELEIFNYFDPKKT 129
            .|.:..:.|.||..|.|.  .:..|..|.|.. |:|......|..|.|:..:.|.:....     
Human    59 TSFTTLETRAFGSNPNLT--KVVFLNTQLCQFRPDAFGGLPRLEDLEVTGSSFLNLSTNI----- 116

  Fly   130 DRGEVLQQHYTDHESLKKVSI-IGFKSTLPENFLENLPALQQLSLKGS--SDLPGNILHPLKNLT 191
                     :::..||.|::: ......|||...::|.||:.|.|:|:  ..||..:..||.:|.
Human   117 ---------FSNLTSLGKLTLNFNMLEALPEGLFQHLAALESLHLQGNQLQALPRRLFQPLTHLK 172

  Fly   192 HLEIVVKNLGKVSGAIFAKQSKLKHLMIDCDAKNSSVEMSAFGPQELWHMTELQSI-ELFNCGDN 255
            .|.:....|.::...:|...:.|:.|.:..:|. |.:....||        :|.|: |||...:|
Human   173 TLNLAQNLLAQLPEELFHPLTSLQTLKLSNNAL-SGLPQGVFG--------KLGSLQELFLDSNN 228

  Fly   256 V---PTELF---------WMSEQLAYIGIRSNISYLSKDFLKVQKKLLTLRLERNNIARLPDQLF 308
            :   |.::|         |:.        |:.|::|..........|..|.|:.|.:..||..||
Human   229 ISELPPQVFSQLFCLERLWLQ--------RNAITHLPLSIFASLGNLTFLSLQWNMLRVLPAGLF 285

  Fly   309 RNTPLILEIHLAFNNLDRIQSGLFDKLKNLQVLNLEHNPITTIALNAFTPI-PTAHIYVG----- 367
            .:||.::.:.|..|.|:.:..|.|..|.||:.|.|.:|.||.:....|..: ....:|:|     
Human   286 AHTPCLVGLSLTHNQLETVAEGTFAHLSNLRSLMLSYNAITHLPAGIFRDLEELVKLYLGSNNLT 350

  Fly   368 -------------KLFKAAKN-----ADWARSTNATI-------------CEEEYIY-------- 393
                         :|...:||     .:....||..:             |...|::        
Human   351 ALHPALFQNLSKLELLSLSKNQLTTLPEGIFDTNYNLFNLALHGNPWQCDCHLAYLFNWLQQYTD 415

  Fly   394 ---GVCIYCKRDEYL-------------------DHF-----------------------ADSEN 413
               .:..||....||                   ||.                       |....
Human   416 RLLNIQTYCAGPAYLKGQVVPALNEKQLVCPVTRDHLGFQVTWPDESKAGGSWDLAVQERAARSQ 480

  Fly   414 CNKPNPKAKDVLA 426
            |...||:...|||
Human   481 CTYSNPEGTVVLA 493

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG5888NP_609794.1 LRR <160..>359 CDD:443914 56/213 (26%)
leucine-rich repeat 168..189 CDD:275380 8/22 (36%)
leucine-rich repeat 190..213 CDD:275380 4/22 (18%)
leucine-rich repeat 214..243 CDD:275380 6/28 (21%)
leucine-rich repeat 244..266 CDD:275380 9/34 (26%)
leucine-rich repeat 267..289 CDD:275380 3/21 (14%)
leucine-rich repeat 290..313 CDD:275380 9/22 (41%)
leucine-rich repeat 314..337 CDD:275380 6/22 (27%)
leucine-rich repeat 338..357 CDD:275380 6/18 (33%)
CPN2NP_001073982.3 LRRNT 21..53 CDD:214470 7/34 (21%)
leucine-rich repeat 30..53 CDD:275380 5/25 (20%)
leucine-rich repeat 75..98 CDD:275380 6/24 (25%)
LRR 95..419 CDD:443914 75/354 (21%)
LRR 1 98..119 4/34 (12%)
leucine-rich repeat 99..122 CDD:275380 4/36 (11%)
LRR 2 122..143 6/20 (30%)
leucine-rich repeat 123..146 CDD:275380 6/22 (27%)
LRR 3 146..167 7/20 (35%)
leucine-rich repeat 147..170 CDD:275380 8/22 (36%)
LRR 4 170..191 4/20 (20%)
leucine-rich repeat 171..194 CDD:275380 4/22 (18%)
LRR 5 194..215 6/29 (21%)
leucine-rich repeat 195..218 CDD:275380 7/31 (23%)
LRR 6 218..239 7/20 (35%)
leucine-rich repeat 219..242 CDD:275380 6/22 (27%)
LRR 7 242..263 4/28 (14%)
leucine-rich repeat 243..266 CDD:275380 4/30 (13%)
LRR 8 266..287 8/20 (40%)
leucine-rich repeat 267..290 CDD:275380 9/22 (41%)
LRR 9 290..311 5/20 (25%)
leucine-rich repeat 291..314 CDD:275380 6/22 (27%)
LRR 10 314..335 8/20 (40%)
leucine-rich repeat 315..338 CDD:275380 7/22 (32%)
LRR 11 338..359 2/20 (10%)
leucine-rich repeat 339..359 CDD:275380 2/19 (11%)
LRR 12 362..383 3/20 (15%)
leucine-rich repeat 363..382 CDD:275380 3/18 (17%)
leucine-rich repeat 387..399 CDD:275378 0/11 (0%)
LRRCT 395..446 CDD:214507 6/50 (12%)

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