DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and AT4G19820

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001320000.1 Gene:AT4G19820 / 827726 AraportID:AT4G19820 Length:368 Species:Arabidopsis thaliana


Alignment Length:433 Identity:99/433 - (22%)
Similarity:164/433 - (37%) Gaps:119/433 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKAWIWFTFVACLFAASTEAASNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRG 65
            :||..||        |.:|:.   :...|||.:|                    ||...:|.:..
plant    26 VKATYWF--------AESESP---LAQIDSSLFT--------------------HLFCAFADINT 59

  Fly    66 ENLQAYSMNENLDIYKHQFSEVT-SLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQI 129
            ...|....:.|    |.:||..| :::|:.|.:|.|||:|||.    .:...:..:......|::
plant    60 LTYQVIVSSRN----KPKFSTFTQTVRRRNPTVKTLLSIGGDF----TYNFAFASMASNPTSRKL 116

  Fly   130 GFIRSAYDLVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFT 194
             ||.|:..|.::.||.||||.:::|.                              .....:.|.
plant   117 -FISSSIKLARSCGFHGLDLNWKYPS------------------------------ITTEMDNFG 150

  Fly   195 ALVRD----VKDSLRADG---FLLSLTVLPNVNSTWYFDIPALNGL---VDFVNLATFDFLTPAR 249
            .|:|:    |:...|:.|   .||:..|.  .:.::|..:..:|.:   :|:|||..:||.....
plant   151 KLLREWRLAVEAEARSSGKPRLLLTAAVF--YSYSYYSVLHPVNAVADSLDWVNLVAYDFYESGS 213

  Fly   250 NPEEADYSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGV 314
            :..... .||:|.|..:..     :.|..|..|...|.|:.|..||...||.||.||   ..:..
plant   214 SRVTCS-PAPLYDPITTGP-----SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCLT---DAKNH 269

  Fly   315 PVVPETSGPA--PEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRP 377
            .....:||||  |:       |.:.|.:|        .:|:..|::.:...|:..:.:   .|  
plant   270 NYYANSSGPAISPD-------GSIGYDQI--------RRFIVDNKATMVYNSNLVQNY---CY-- 314

  Fly   378 VDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDD 420
                 .:..|:.|||..|...|..||:.:.|.|...:.:..||
plant   315 -----AKKTWIGYDDNQSIVMKVKYAKQRGLLGYFSWHIGADD 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 93/411 (23%)
AT4G19820NP_001320000.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
43.870

Return to query results.
Submit another query.