DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and AT4G19740

DIOPT Version :10

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_193709.3 Gene:AT4G19740 / 827718 AraportID:AT4G19740 Length:211 Species:Arabidopsis thaliana


Alignment Length:187 Identity:52/187 - (27%)
Similarity:76/187 - (40%) Gaps:42/187 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 FIRSAYDLVKTYGFDGLDLAYQFPKNKPRKVH-GDLGLAWKSIKKLFTGDFIVDPHAALHKEQFT 194
            ||.|:..:.::.||.|||||:::|.|.....: |.|...|:|               |:..|...
plant    11 FISSSISIARSLGFYGLDLAWEYPNNDVEMNNFGKLLQEWRS---------------AVEVESQR 60

  Fly   195 ALVRDVKDSLRADGFLLSLTV--LPNVNSTWYFDIPALNGLVDFVNLATFDF--LTPARNPEEAD 255
            ..:|.:         ||:..|  ..:.||..| .:.|:|..:|:|||..::|  ||....|....
plant    61 TGIRPL---------LLTAAVYYTSDYNSVSY-PVQAINRSLDWVNLIAYEFYGLTTEIGPPAGL 115

  Fly   256 YSAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKL--TKDSG 310
            |...|..|.|          |..:::||..|.|..|...|....|.:|.|  .||.|
plant   116 YDPSIKGPCG----------DTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKDHG 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 52/187 (28%)
AT4G19740NP_193709.3 GH18_chitinase-like <23..211 CDD:471972 49/175 (28%)

Return to query results.
Submit another query.