DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and Ctbs

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_112285.1 Gene:Ctbs / 81652 RGDID:621338 Length:367 Species:Rattus norvegicus


Alignment Length:332 Identity:73/332 - (21%)
Similarity:116/332 - (34%) Gaps:86/332 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 AYD-----LVKTYG-FDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQF 193
            :||     .|..:| :|...:.|...|.....:.||:.|. ..|...|...:|.. ..||.|.| 
  Rat    57 SYDWSQITTVAVFGKYDSELMCYAHSKGARVVLKGDVALK-DIINPTFRASWIAQ-KVALAKAQ- 118

  Fly   194 TALVRDVKDSLRADGFLLSLTVLPNVNSTWYFDIPALNGLVDFV----------NLATFDFLTPA 248
                       ..||..:.:....:.:|..|   .||..||...          :..|||.   |
  Rat   119 -----------HMDGINIDIEQEVDCSSPEY---EALTALVRETTEGFHREIEGSQVTFDV---A 166

  Fly   249 RNPEEADYSAPIYHPDGSKDR---LAHLNADFQVEYW---------------------LSQGFPS 289
            .:|:..|...  |:..|..|.   |..::.|.|.:.|                     |..|...
  Rat   167 WSPKGIDKRC--YNYTGIADACDFLFVMSYDEQSQIWSECIAAANAPYNQTLTGYGDYLRMGISP 229

  Fly   290 NKINLGVATYGNAW---KLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQ 351
            .|:.:|:..||..:   .|:||. :..:..||....|..:....|.|..:...::...:|.  :|
  Rat   230 RKLVMGIPWYGYDYICLNLSKDD-VCAIAKVPFRGAPCSDAAGHQVPYRVIMKQVNSSVSG--SQ 291

  Fly   352 FLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFD- 415
            :.:..::|.....|||.|.             ..:|  ||:|.|.|.|||:.:...|.|:.::: 
  Rat   292 WNQDQQAPYYNYKDPTGRL-------------HQVW--YDNPRSISLKAAFVKHYGLRGIGMWNA 341

  Fly   416 --LSYDD 420
              |.|.|
  Rat   342 NCLDYSD 348

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 73/332 (22%)
CtbsNP_112285.1 GH18_chitobiase 23..363 CDD:119354 73/332 (22%)
Glyco_18 <100..343 CDD:214753 59/281 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.