DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and Cht4

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_524962.2 Gene:Cht4 / 49815 FlyBaseID:FBgn0022700 Length:462 Species:Drosophila melanogaster


Alignment Length:449 Identity:117/449 - (26%)
Similarity:202/449 - (44%) Gaps:96/449 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 IWFTFVACLFAASTEAASNLV-CYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGL--RGE 66
            ||.....||......::..|: ||:.:.:..|.|.||....|::.:|  |:|:.|.:.|:  .||
  Fly     6 IWALAALCLCLGQVASSEKLLNCYWGTWANYRPGDGKFTPSDIDPSL--CTHISYTFFGISDAGE 68

  Fly    67 --NLQAY-SMNENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQ 128
              :|..: .|::.|..    .|:..:||::.|:||:|..|||.:    :...|| ..:..:..::
  Fly    69 FKSLDTWLDMDDGLGF----ISQTIALKQRNPNLKILAVVGGWN----EGSTKY-SAMAADPAKR 124

  Fly   129 IGFIRSAYDLVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQF 193
            ..|:.::...::.|.||||||.:::|        |..|                  .:...:|.|
  Fly   125 ATFVSTSLAFIQQYSFDGLDLDWEYP--------GQRG------------------GSEADRENF 163

  Fly   194 TALVRDVKDSLRADGFLLSLTV-LPNVNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYS 257
            ..|:|::|::....|..|.:.| ....:::..:||||::..:.|:|:.|:||             
  Fly   164 VTLLREIKETYDQYGLELGIAVGASEKSASISYDIPAISQHLTFINVMTYDF------------- 215

  Fly   258 APIYHPDGSKDRLAHLNADF-----QVEYWLSQGFPSNKINLGVATYGNAWKLTKDS-GLEGVPV 316
                |.  :.|....|||..     .::||||.|.|:.|:.||:..||::::::..| ...|...
  Fly   216 ----HM--ALDGYLGLNAPLPEVAESIDYWLSHGAPAEKLILGIGFYGHSYQMSDSSQNWPGAAC 274

  Fly   317 VPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQ 381
            :    ||...|..:::.|.|.|.|||  |:|.|..|.:.|.:|.....|.               
  Fly   275 I----GPGTAGVYTRENGFLGYHEIC--LNNWQTVFDQENGAPYAFQGDQ--------------- 318

  Fly   382 ITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAIKYRL 440
                 |:.||:|:|...|......:||||..::.:..|||||.| |:.||:|:.:...|
  Fly   319 -----WIGYDNPESIQLKMQLVESRNLGGAMMWSIETDDFRGLC-GESYPLLKTMNRAL 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 112/429 (26%)
Cht4NP_524962.2 GH18_chitolectin_chitotriosidase 26..371 CDD:119351 111/427 (26%)
Glyco_18 28..351 CDD:214753 101/404 (25%)
CBM_14 421..462 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463800
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.