DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and Cht10

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001036422.1 Gene:Cht10 / 3355116 FlyBaseID:FBgn0250907 Length:2286 Species:Drosophila melanogaster


Alignment Length:422 Identity:125/422 - (29%)
Similarity:209/422 - (49%) Gaps:70/422 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 LVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKHQFSEVT 88
            ::||:.:.::.|:|:|: ..|| :|..:.|:|::||:|.|....|...:.:...|:..:.::.||
  Fly   967 VICYFTNWAWYRKGIGR-FTPD-DINTELCTHVIYGFAVLDYSELVLRTHDSWADVENNFYTRVT 1029

  Fly    89 SLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYDLVKTYGFDGLDLAYQF 153
            |||.|  .:||.|::||.:|...|   ||..|:.....|. .|:|.|.:.::.|||:||||.:::
  Fly  1030 SLKSK--GIKVSLALGGWNDSQGD---KYSRLVRSPMARS-RFVRHALEFIEKYGFEGLDLDWEY 1088

  Fly   154 PKNKPRKVHGDLGLAWKS-IKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLTVLP 217
            |            :.|:: ..|..|.:          |:.|||.|:::.::.|..|.:||..|.|
  Fly  1089 P------------VCWQTECNKGSTEE----------KDGFTAWVQELSEAFRPRGLMLSTAVSP 1131

  Fly   218 N---VNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIY-HPDGSKDRLAHLNADFQ 278
            :   :::.  :|||.|:...|::.:.|:||  .....::..:.||:| |||   |...:.|.::.
  Fly  1132 SRKIIDAG--YDIPQLSRYFDWIAVMTYDF--HGHWDKKTGHVAPLYHHPD---DDFEYFNVNYS 1189

  Fly   279 VEYWLSQGFPSNKINLGVATYGNAWKL--TKDSGLEGVPVVPETSGPAP--EGFQSQKPGLLSYA 339
            :.||:.:|.||.|:.:|:..||.::.|  |..|||       ....|||  .|..::..|.|:|.
  Fly  1190 INYWMEKGAPSQKLVMGIPLYGQSFTLENTNSSGL-------NAKAPAPGEAGEFTRAAGFLAYY 1247

  Fly   340 EICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYAR 404
            |||.::          |....:.|.|...|.|..||:...       |||||.||....|:...|
  Fly  1248 EICERV----------NRQGWQVVHDEFGRMGPYAYKGTQ-------WVSYDSPDMVRKKSLLVR 1295

  Fly   405 VKNLGGVALFDLSYDDFRGQCSGDKYPILRAI 436
            ...|||..::.|..|||:.:|....:|:|..|
  Fly  1296 SLKLGGGMVWALDLDDFKNRCGNGVHPLLTEI 1327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 125/422 (30%)
Cht10NP_001036422.1 Glyco_18 220..565 CDD:214753
GH18_chitolectin_chitotriosidase 221..586 CDD:119351
ChtBD2 697..737 CDD:214696
CBM_14 801..848 CDD:279884
CBM_14 875..918 CDD:279884
Glyco_18 966..1310 CDD:214753 118/403 (29%)
GH18_chitolectin_chitotriosidase 967..1331 CDD:119351 125/422 (30%)
Glyco_18 1410..1753 CDD:214753
GH18_chitolectin_chitotriosidase 1411..1774 CDD:119351
ChtBD2 1834..1871 CDD:214696
Glyco_18 1909..2253 CDD:214753
GH18_chitolectin_chitotriosidase 1910..2274 CDD:119351
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45463778
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

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