DRSC/TRiP Functional Genomics Resources

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Protein Alignment Idgf2 and Chit1

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_001073157.1 Gene:Chit1 / 289032 RGDID:1305646 Length:464 Species:Rattus norvegicus


Alignment Length:445 Identity:129/445 - (28%)
Similarity:215/445 - (48%) Gaps:85/445 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VACLFAASTEAASNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMN 74
            |..|......:|:.|.||:.:.:..|.|..:.|..|::..|  |:|::|.:|||....:.....|
  Rat    10 VTTLLMIQWGSAAKLFCYFTNWAQYRSGAARFLPRDVDPNL--CTHVIYAFAGLNNHQVSTVEPN 72

  Fly    75 ENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYDLV 139
            :.|     .:.|:.|||::.|.||.||:|||    ......|:.|::.....||. |:.||...:
  Rat    73 DEL-----FYQELNSLKKRNPKLKTLLAVGG----WSFGTQKFTDMVATASTRQT-FVNSALSFL 127

  Fly   140 KTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDV---- 200
            :|:|||||||.:::|        |..|                  ..|:.||:||||::|:    
  Rat   128 RTHGFDGLDLDWEYP--------GSRG------------------SPAVDKERFTALIQDLAKAF 166

  Fly   201 KDSLRADG--FLLSLTVLP----NVNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAP 259
            ::..||.|  .||....:|    :|::.  :::..:...:||:||..:||  .:...:...:::|
  Rat   167 QEEARASGKSRLLLTAAVPTGRGHVDAG--YEVDKIVQSLDFINLMAYDF--HSSWDKTTGHNSP 227

  Fly   260 IYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKL--TKDSGLEGVPVVPETSG 322
            :|...|...:.|..|.|..|..||.:|.|::|:.||:..||.::.|  :.|||: |.|    .:|
  Rat   228 LYKRQGETGKDAEKNVDAAVTLWLQKGTPASKLMLGMPAYGRSFTLASSSDSGV-GAP----ATG 287

  Fly   323 PAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQITEG-I 386
            |...|..:::.|:|.|.|:|.         .||.:    |:.|..     :.|      :::| .
  Rat   288 PGAPGPYTKEKGILVYFEVCS---------WKGKQ----RIEDQK-----VPY------VSQGNQ 328

  Fly   387 WVSYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQ-CSGDKYPILRAIKYRL 440
            ||.:||.:|...||||.:.|.|||..::.|..|||:|. |:..:||::|.:...|
  Rat   329 WVGFDDRESFRAKAAYVKQKGLGGAMVWILDGDDFKGSFCNEGQYPLIRTLHQEL 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 125/430 (29%)
Chit1NP_001073157.1 GH18_chitolectin_chitotriosidase 24..383 CDD:119351 125/429 (29%)
ChtBD2 416..463 CDD:214696
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350393
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.940

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