DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and chil-3

DIOPT Version :10

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_496128.1 Gene:chil-3 / 182432 WormBaseID:WBGene00007467 Length:447 Species:Caenorhabditis elegans


Alignment Length:445 Identity:93/445 - (20%)
Similarity:156/445 - (35%) Gaps:160/445 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 YDSSSYTREGLGKLLNPDLEIALQFCSHLVY-------GYAGLRGENLQAYSMNENLDIYKHQFS 85
            :::|..||.            .||..:|::|       |...|.||..            :.:|.
 Worm   108 FENSGLTRR------------HLQMVTHIIYLFARPTNGVMTLDGERT------------RRKFQ 148

  Fly    86 EVTSLKRKYPH-LKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYDLVKTYGFDGLDL 149
            |:.|..|:... :||::||||.     ||...:..::..|..|.: ||:|....||....||:::
 Worm   149 EMRSKAREVSSTVKVMISVGGH-----DHSGAFSAIMSNEASRSV-FIKSIVSFVKNEDIDGIEI 207

  Fly   150 AYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKDSLRADGFLLSLT 214
            .:.:||      |.|:     :...:|..|.         :.:||.|   .|.:.|.:.:::||.
 Worm   208 FWMWPK------HRDV-----NNYSIFIQDL---------RNEFTEL---QKRTNRKNEYIISLL 249

  Fly   215 VLPNVNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIYHPDGSKDRLAHLNADFQV 279
            | |. .|.|.||.......|||.|:.:..|......|:     :|:|..:|.       |.|..:
 Worm   250 V-PK-KSYWSFDFEDFLKFVDFFNIYSTQFREKQVGPD-----SPLYGGEGR-------NIDETM 300

  Fly   280 EYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSGPAPEGFQSQKPGLLSYAEICGK 344
            :|:..:....:|.|:.|:.:|..|   ||:                                   
 Worm   301 KYYTCKTGQPSKFNIFVSFHGTFW---KDA----------------------------------- 327

  Fly   345 LSNPQNQFLKGNESPLRRVSDP-------TKRFGGIAYRPVDGQ-------------ITEGIWV- 388
                        |.|||...|.       ||....:.:|.:..|             .|..||: 
 Worm   328 ------------ELPLRNDFDDIFKDKNLTKGAFAVRWRELLQQKWNLEDIKFHNLTKTSYIWIP 380

  Fly   389 -------SYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAI 436
                   :.:|..|...|..|....|:||:.::.:..||       |.:.:|:.:
 Worm   381 GPPTWFMTLEDKRSLREKTKYVADYNIGGITMWTIDQDD-------DDHTLLKVV 428

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 93/445 (21%)
chil-3NP_496128.1 Glyco_18 100..418 CDD:214753 89/426 (21%)

Return to query results.
Submit another query.