DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Idgf2 and cht-1

DIOPT Version :9

Sequence 1:NP_477257.2 Gene:Idgf2 / 34979 FlyBaseID:FBgn0020415 Length:440 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:457 Identity:114/457 - (24%)
Similarity:181/457 - (39%) Gaps:110/457 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 ASTEAASNLV--CYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGE-NLQAYSMNE-- 75
            |.:|..::.:  ||:.:.:..|:|..|.:..|....|  |:|:::.:..:..: .::||...:  
 Worm    45 ARSEPTNSYIRPCYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLP 107

  Fly    76 NLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEG----EKVRQIGFIRSAY 136
            |....:..:..|..||.....||.|||.||        .:....|.:|    ...|:: ||.||.
 Worm   108 NDWAGEGMYRRVNKLKVTDTQLKTLLSFGG--------WSFGTALFQGMAASSASRKV-FIDSAI 163

  Fly   137 DLVKTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVK 201
            ..|:|:||||:|:.:::|.                              .|.....:.|||:::|
 Worm   164 TFVRTWGFDGIDIDWEYPS------------------------------GATDMANYVALVKELK 198

  Fly   202 -------DSLRADGFLLSLTVL--PNVNSTWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYS 257
                   .|...|..|::..|.  |......| |||.|....||:.|.::||.  ........::
 Worm   199 AACESEAGSTGKDRLLVTAAVAAGPATIDAGY-DIPNLAPNFDFILLMSYDFF--GAWASLVGFN 260

  Fly   258 APIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETSG 322
            :|:|............|.|....||..:|.|..||.:|:.|||..|.|...|.:.     |.|||
 Worm   261 SPLYATTELPAEWNGWNVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAIN-----PGTSG 320

  Fly   323 -PAPEGFQSQKPGLLSYAEICGKLSNPQNQF----------LKGNESPLRRVSDPTKRFGGIAYR 376
             ||......|:.|:.:|.|.|..|:|...::          ::||:                   
 Worm   321 SPAKITQYVQEAGVGAYFEFCEMLANGATRYWDSQSQVPYLVQGNQ------------------- 366

  Fly   377 PVDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQCS---GDKYPILRAIKY 438
                      |.||||.:|.:||.||.:.:..||..::.|.:|||...||   |..||::..|..
 Worm   367 ----------WWSYDDEESFANKMAYVKREGYGGAFVWTLDFDDFNAGCSNSNGQLYPLISVIAK 421

  Fly   439 RL 440
            .|
 Worm   422 EL 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Idgf2NP_477257.2 GH18_IDGF 23..440 CDD:119352 111/448 (25%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 111/445 (25%)
Glyco_18 57..399 CDD:214753 102/419 (24%)
CBM_14 481..532 CDD:279884
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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